Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CGREF1Q99674 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CGREF1Q99674 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CGREF1Q99674 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.27■□□□□ 0.68
CGREF1Q99674 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CGREF1Q99674 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.27■□□□□ 0.68
CGREF1Q99674 AC120498.10-201ENST00000621827 505 ntBASIC19.27■□□□□ 0.68
CGREF1Q99674 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 AC008406.3-201ENST00000620001 1374 ntBASIC19.27■□□□□ 0.68
CGREF1Q99674 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CGREF1Q99674 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.27■□□□□ 0.68
CGREF1Q99674 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CGREF1Q99674 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CGREF1Q99674 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.27■□□□□ 0.67
CGREF1Q99674 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CGREF1Q99674 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CGREF1Q99674 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CGREF1Q99674 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CGREF1Q99674 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CGREF1Q99674 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.26■□□□□ 0.67
CGREF1Q99674 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CGREF1Q99674 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.26■□□□□ 0.67
CGREF1Q99674 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.26■□□□□ 0.67
CGREF1Q99674 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.26■□□□□ 0.67
CGREF1Q99674 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CGREF1Q99674 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.26■□□□□ 0.67
CGREF1Q99674 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CGREF1Q99674 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CGREF1Q99674 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CGREF1Q99674 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CGREF1Q99674 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.26■□□□□ 0.67
CGREF1Q99674 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CGREF1Q99674 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CGREF1Q99674 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.26■□□□□ 0.67
CGREF1Q99674 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CGREF1Q99674 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CGREF1Q99674 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CGREF1Q99674 AL158211.5-201ENST00000623583 2518 ntBASIC19.25■□□□□ 0.67
CGREF1Q99674 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CGREF1Q99674 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.25■□□□□ 0.67
CGREF1Q99674 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.25■□□□□ 0.67
CGREF1Q99674 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.25■□□□□ 0.67
CGREF1Q99674 AL031432.3-201ENST00000607698 485 ntBASIC19.25■□□□□ 0.67
CGREF1Q99674 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.25■□□□□ 0.67
CGREF1Q99674 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CGREF1Q99674 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 AC116562.4-201ENST00000641316 2276 ntBASIC19.25■□□□□ 0.67
CGREF1Q99674 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGREF1Q99674 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 AC087289.5-201ENST00000586076 3175 ntBASIC19.24■□□□□ 0.67
CGREF1Q99674 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CGREF1Q99674 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.24■□□□□ 0.67
CGREF1Q99674 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.24■□□□□ 0.67
CGREF1Q99674 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.24■□□□□ 0.67
CGREF1Q99674 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.24■□□□□ 0.67
CGREF1Q99674 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.24■□□□□ 0.67
CGREF1Q99674 AC110285.6-201ENST00000617652 491 ntBASIC19.24■□□□□ 0.67
CGREF1Q99674 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.24■□□□□ 0.67
CGREF1Q99674 AL358852.1-201ENST00000623174 1268 ntBASIC19.24■□□□□ 0.67
CGREF1Q99674 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.24■□□□□ 0.67
CGREF1Q99674 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CGREF1Q99674 LETM1P2-201ENST00000597330 2178 ntBASIC19.24■□□□□ 0.67
CGREF1Q99674 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.24■□□□□ 0.67
CGREF1Q99674 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.24■□□□□ 0.67
CGREF1Q99674 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CGREF1Q99674 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.24■□□□□ 0.67
CGREF1Q99674 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CGREF1Q99674 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms