Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.32■□□□□ 0.84
NDNQ99608 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.32■□□□□ 0.84
NDNQ99608 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDNQ99608 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDNQ99608 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDNQ99608 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.32■□□□□ 0.84
NDNQ99608 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.32■□□□□ 0.84
NDNQ99608 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDNQ99608 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NDNQ99608 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDNQ99608 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDNQ99608 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.31■□□□□ 0.84
NDNQ99608 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.31■□□□□ 0.84
NDNQ99608 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.31■□□□□ 0.84
NDNQ99608 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.31■□□□□ 0.84
NDNQ99608 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
NDNQ99608 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.31■□□□□ 0.84
NDNQ99608 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDNQ99608 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NDNQ99608 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NDNQ99608 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NDNQ99608 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.3■□□□□ 0.84
NDNQ99608 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.3■□□□□ 0.84
NDNQ99608 AC092720.2-201ENST00000602388 1665 ntBASIC20.3■□□□□ 0.84
NDNQ99608 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
NDNQ99608 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
NDNQ99608 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.3■□□□□ 0.84
NDNQ99608 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.3■□□□□ 0.84
NDNQ99608 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.3■□□□□ 0.84
NDNQ99608 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.3■□□□□ 0.84
NDNQ99608 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.3■□□□□ 0.84
NDNQ99608 MIR2861-201ENST00000636310 90 ntBASIC20.3■□□□□ 0.84
NDNQ99608 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDNQ99608 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NDNQ99608 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NDNQ99608 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDNQ99608 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDNQ99608 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NDNQ99608 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDNQ99608 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.29■□□□□ 0.84
NDNQ99608 AC007322.3-201ENST00000426526 701 ntBASIC20.29■□□□□ 0.84
NDNQ99608 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.29■□□□□ 0.84
NDNQ99608 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.29■□□□□ 0.84
NDNQ99608 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NDNQ99608 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NDNQ99608 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NDNQ99608 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDNQ99608 AL162377.1-201ENST00000618844 1793 ntBASIC20.29■□□□□ 0.84
NDNQ99608 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDNQ99608 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.28■□□□□ 0.84
NDNQ99608 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NDNQ99608 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.28■□□□□ 0.84
NDNQ99608 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NDNQ99608 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDNQ99608 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.28■□□□□ 0.84
NDNQ99608 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NDNQ99608 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDNQ99608 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.28■□□□□ 0.84
NDNQ99608 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDNQ99608 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.28■□□□□ 0.84
NDNQ99608 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDNQ99608 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NDNQ99608 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDNQ99608 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDNQ99608 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.28■□□□□ 0.84
NDNQ99608 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.28■□□□□ 0.84
NDNQ99608 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NDNQ99608 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDNQ99608 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.28■□□□□ 0.84
NDNQ99608 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDNQ99608 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDNQ99608 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
NDNQ99608 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDNQ99608 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.27■□□□□ 0.84
NDNQ99608 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
NDNQ99608 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms