Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.48■□□□□ 0.55
SPENQ96T58 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPENQ96T58 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SPENQ96T58 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPENQ96T58 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.47■□□□□ 0.55
SPENQ96T58 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.47■□□□□ 0.55
SPENQ96T58 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SPENQ96T58 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SPENQ96T58 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SPENQ96T58 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPENQ96T58 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPENQ96T58 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
SPENQ96T58 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SPENQ96T58 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.47■□□□□ 0.55
SPENQ96T58 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.47■□□□□ 0.55
SPENQ96T58 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPENQ96T58 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.47■□□□□ 0.55
SPENQ96T58 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SPENQ96T58 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.46■□□□□ 0.55
SPENQ96T58 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.46■□□□□ 0.55
SPENQ96T58 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.46■□□□□ 0.55
SPENQ96T58 AF186192.3-201ENST00000583427 947 ntBASIC18.46■□□□□ 0.55
SPENQ96T58 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPENQ96T58 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPENQ96T58 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPENQ96T58 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPENQ96T58 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.46■□□□□ 0.55
SPENQ96T58 AP001412.1-201ENST00000608405 714 ntBASIC18.46■□□□□ 0.55
SPENQ96T58 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPENQ96T58 AC127496.7-201ENST00000625110 1798 ntBASIC18.46■□□□□ 0.55
SPENQ96T58 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SPENQ96T58 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPENQ96T58 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPENQ96T58 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPENQ96T58 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPENQ96T58 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SPENQ96T58 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SPENQ96T58 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPENQ96T58 EP400NL-214ENST00000641289 2402 ntBASIC18.45■□□□□ 0.54
SPENQ96T58 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.45■□□□□ 0.54
SPENQ96T58 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPENQ96T58 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPENQ96T58 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPENQ96T58 KRASP1-201ENST00000407852 552 ntBASIC18.45■□□□□ 0.54
SPENQ96T58 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.45■□□□□ 0.54
SPENQ96T58 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.45■□□□□ 0.54
SPENQ96T58 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPENQ96T58 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPENQ96T58 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPENQ96T58 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.45■□□□□ 0.54
SPENQ96T58 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
SPENQ96T58 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPENQ96T58 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.45■□□□□ 0.54
SPENQ96T58 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPENQ96T58 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPENQ96T58 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SPENQ96T58 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.44■□□□□ 0.54
SPENQ96T58 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPENQ96T58 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.44■□□□□ 0.54
SPENQ96T58 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SPENQ96T58 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPENQ96T58 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPENQ96T58 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.44■□□□□ 0.54
SPENQ96T58 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.44■□□□□ 0.54
SPENQ96T58 NUDT16P1-203ENST00000513809 620 ntBASIC18.44■□□□□ 0.54
SPENQ96T58 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.44■□□□□ 0.54
SPENQ96T58 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SPENQ96T58 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPENQ96T58 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPENQ96T58 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPENQ96T58 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.44■□□□□ 0.54
SPENQ96T58 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPENQ96T58 ARMC10P1-201ENST00000313754 855 ntBASIC18.44■□□□□ 0.54
SPENQ96T58 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.44■□□□□ 0.54
SPENQ96T58 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.44■□□□□ 0.54
SPENQ96T58 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
SPENQ96T58 AC133561.1-201ENST00000568600 2415 ntBASIC18.43■□□□□ 0.54
SPENQ96T58 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SPENQ96T58 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SPENQ96T58 AC005521.1-201ENST00000393351 872 ntBASIC18.43■□□□□ 0.54
SPENQ96T58 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.43■□□□□ 0.54
SPENQ96T58 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPENQ96T58 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SPENQ96T58 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SPENQ96T58 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SPENQ96T58 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPENQ96T58 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPENQ96T58 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SPENQ96T58 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.43■□□□□ 0.54
SPENQ96T58 AC006011.2-201ENST00000621313 1158 ntBASIC18.43■□□□□ 0.54
SPENQ96T58 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.43■□□□□ 0.54
SPENQ96T58 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.43■□□□□ 0.54
SPENQ96T58 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPENQ96T58 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPENQ96T58 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.43■□□□□ 0.54
SPENQ96T58 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.43■□□□□ 0.54
SPENQ96T58 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.43■□□□□ 0.54
SPENQ96T58 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SPENQ96T58 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms