Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 AL356441.2-201ENST00000443009 864 ntBASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 AC093503.3-201ENST00000624917 2352 ntBASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.9■□□□□ 0.46
NEDD4LQ96PU5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
NEDD4LQ96PU5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NEDD4LQ96PU5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NEDD4LQ96PU5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NEDD4LQ96PU5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 SLC47A1P1-202ENST00000449666 945 ntBASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
NEDD4LQ96PU5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.88■□□□□ 0.45
NEDD4LQ96PU5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 AP006587.3-201ENST00000525742 1516 ntBASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEDD4LQ96PU5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 MIR4466-201ENST00000606121 54 ntBASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NEDD4LQ96PU5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms