Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CNTNAP3BQ96NU0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTNAP3BQ96NU0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 IER3-202ENST00000376377 1350 ntBASIC19.44■□□□□ 0.7
CNTNAP3BQ96NU0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 FAM8A6P-201ENST00000407496 1135 ntBASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 AC079089.2-201ENST00000531211 1277 ntBASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTNAP3BQ96NU0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.42■□□□□ 0.7
CNTNAP3BQ96NU0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTNAP3BQ96NU0 AC061975.6-201ENST00000579045 1553 ntBASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms