Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 MIR3621-201ENST00000580529 85 ntBASIC17.45■□□□□ 0.38
CMTM3Q96MX0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 AL691432.2-201ENST00000607222 2038 ntBASIC17.44■□□□□ 0.38
CMTM3Q96MX0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 RARRES2P1-201ENST00000474487 481 ntBASIC17.44■□□□□ 0.38
CMTM3Q96MX0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMTM3Q96MX0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 BX119927.1-201ENST00000636596 1552 ntBASIC17.43■□□□□ 0.38
CMTM3Q96MX0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CMTM3Q96MX0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 AC061975.6-201ENST00000579045 1553 ntBASIC17.42■□□□□ 0.38
CMTM3Q96MX0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 KRT16P3-201ENST00000439127 1283 ntBASIC17.42■□□□□ 0.38
CMTM3Q96MX0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.42■□□□□ 0.38
CMTM3Q96MX0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CMTM3Q96MX0 AC093503.3-201ENST00000624917 2352 ntBASIC17.42■□□□□ 0.38
CMTM3Q96MX0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
CMTM3Q96MX0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms