Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PRICKLE1Q96MT3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 C2orf69P4-201ENST00000565394 541 ntBASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE1Q96MT3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE1Q96MT3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PRICKLE1Q96MT3 KRT8P36-201ENST00000489121 1440 ntBASIC20.95■□□□□ 0.95
PRICKLE1Q96MT3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 AC060766.5-201ENST00000590539 871 ntBASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 HLA-B-256ENST00000639848 1089 ntBASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PRICKLE1Q96MT3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.94■□□□□ 0.94
PRICKLE1Q96MT3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms