Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL53Q96EL3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 AC019069.1-201ENST00000610008 1333 ntBASIC15.23■□□□□ 0.03
MRPL53Q96EL3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 KRT19P1-201ENST00000405746 1186 ntBASIC15.23■□□□□ 0.03
MRPL53Q96EL3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.23■□□□□ 0.03
MRPL53Q96EL3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 SMG8-203ENST00000578922 2178 ntBASIC15.22■□□□□ 0.03
MRPL53Q96EL3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 DPP3P2-201ENST00000416030 1696 ntBASIC15.22■□□□□ 0.03
MRPL53Q96EL3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 AFG3L1P-217ENST00000557444 2447 ntBASIC15.22■□□□□ 0.03
MRPL53Q96EL3 AC112907.3-201ENST00000577781 2400 ntBASIC15.22■□□□□ 0.03
MRPL53Q96EL3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
MRPL53Q96EL3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 TMEM179-206ENST00000616017 1645 ntBASIC15.21■□□□□ 0.03
MRPL53Q96EL3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 KRT18P14-201ENST00000534205 1250 ntBASIC15.21■□□□□ 0.03
MRPL53Q96EL3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPL53Q96EL3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MRPL53Q96EL3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
MRPL53Q96EL3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MRPL53Q96EL3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL53Q96EL3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL53Q96EL3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL53Q96EL3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL53Q96EL3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.2■□□□□ 0.02
MRPL53Q96EL3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms