Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
RTP4Q96DX8 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.74■□□□□ 0.91
RTP4Q96DX8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.74■□□□□ 0.91
RTP4Q96DX8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.74■□□□□ 0.91
RTP4Q96DX8 KRT18P11-201ENST00000435214 1283 ntBASIC20.74■□□□□ 0.91
RTP4Q96DX8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.74■□□□□ 0.91
RTP4Q96DX8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RTP4Q96DX8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.74■□□□□ 0.91
RTP4Q96DX8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.74■□□□□ 0.91
RTP4Q96DX8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.74■□□□□ 0.91
RTP4Q96DX8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 AFG3L1P-217ENST00000557444 2447 ntBASIC20.74■□□□□ 0.91
RTP4Q96DX8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTP4Q96DX8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.73■□□□□ 0.91
RTP4Q96DX8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.73■□□□□ 0.91
RTP4Q96DX8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RTP4Q96DX8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RTP4Q96DX8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.73■□□□□ 0.91
RTP4Q96DX8 AC013268.1-206ENST00000638368 961 ntBASIC20.73■□□□□ 0.91
RTP4Q96DX8 AC112229.1-201ENST00000639295 961 ntBASIC20.73■□□□□ 0.91
RTP4Q96DX8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.73■□□□□ 0.91
RTP4Q96DX8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 DPP3P2-201ENST00000416030 1696 ntBASIC20.73■□□□□ 0.91
RTP4Q96DX8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTP4Q96DX8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.72■□□□□ 0.91
RTP4Q96DX8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.72■□□□□ 0.91
RTP4Q96DX8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RTP4Q96DX8 PGM5P4-201ENST00000421970 445 ntBASIC20.72■□□□□ 0.91
RTP4Q96DX8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.72■□□□□ 0.91
RTP4Q96DX8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RTP4Q96DX8 CYP21A1P-202ENST00000354927 1481 ntBASIC20.72■□□□□ 0.91
RTP4Q96DX8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.72■□□□□ 0.91
RTP4Q96DX8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.72■□□□□ 0.91
RTP4Q96DX8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTP4Q96DX8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.72■□□□□ 0.91
RTP4Q96DX8 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.72■□□□□ 0.91
RTP4Q96DX8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RTP4Q96DX8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 AL356652.1-201ENST00000615962 565 ntBASIC20.71■□□□□ 0.91
RTP4Q96DX8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms