Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ECHDC3Q96DC8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 UNC93B5-201ENST00000530315 699 ntBASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 PNMA6B-201ENST00000538162 1200 ntBASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 MIR4651-201ENST00000582622 73 ntBASIC20.33■□□□□ 0.85
ECHDC3Q96DC8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.33■□□□□ 0.84
ECHDC3Q96DC8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.33■□□□□ 0.84
ECHDC3Q96DC8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC3Q96DC8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC3Q96DC8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC3Q96DC8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC3Q96DC8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ECHDC3Q96DC8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 AC092368.3-202ENST00000574180 1591 ntBASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ECHDC3Q96DC8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 PTBP1P-201ENST00000554374 1601 ntBASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ECHDC3Q96DC8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms