Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 AC079140.4-201ENST00000507448 529 ntBASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 BX119927.1-201ENST00000636596 1552 ntBASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPS4Y2Q8TD47 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RPS4Y2Q8TD47 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RPS4Y2Q8TD47 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPS4Y2Q8TD47 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RPS4Y2Q8TD47 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 AL691432.2-201ENST00000607222 2038 ntBASIC17.76■□□□□ 0.43
RPS4Y2Q8TD47 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPS4Y2Q8TD47 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 AL358852.1-201ENST00000623174 1268 ntBASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RPS4Y2Q8TD47 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 AC120498.10-201ENST00000621827 505 ntBASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 TREX1-205ENST00000625293 1783 ntBASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RPS4Y2Q8TD47 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms