Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM58Q8NG06 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.54■■□□□ 1.04
TRIM58Q8NG06 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM58Q8NG06 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 KRT87P-202ENST00000534226 1464 ntBASIC21.53■■□□□ 1.04
TRIM58Q8NG06 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM58Q8NG06 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 TMEM179-206ENST00000616017 1645 ntBASIC21.52■■□□□ 1.04
TRIM58Q8NG06 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 AP001330.3-201ENST00000520123 633 ntBASIC21.52■■□□□ 1.04
TRIM58Q8NG06 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 AC138907.5-202ENST00000569484 235 ntBASIC21.52■■□□□ 1.04
TRIM58Q8NG06 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 AC120498.10-201ENST00000621827 505 ntBASIC21.52■■□□□ 1.04
TRIM58Q8NG06 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 AC098818.2-201ENST00000564925 2320 ntBASIC21.52■■□□□ 1.04
TRIM58Q8NG06 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM58Q8NG06 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
TRIM58Q8NG06 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
TRIM58Q8NG06 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.52■■□□□ 1.03
TRIM58Q8NG06 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM58Q8NG06 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 RASA4CP-201ENST00000424092 1398 ntBASIC21.5■■□□□ 1.03
TRIM58Q8NG06 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 EDA-201ENST00000338901 1233 ntBASIC21.5■■□□□ 1.03
TRIM58Q8NG06 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.5■■□□□ 1.03
TRIM58Q8NG06 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms