Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
PCDH20Q8N6Y1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 AL157384.1-201ENST00000445995 2473 ntBASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 AC027702.1-201ENST00000563810 1770 ntBASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 AL356652.1-201ENST00000615962 565 ntBASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDH20Q8N6Y1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH20Q8N6Y1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDH20Q8N6Y1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDH20Q8N6Y1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH20Q8N6Y1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH20Q8N6Y1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms