Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TTC39CQ8N584 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
TTC39CQ8N584 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.61■■□□□ 1.05
TTC39CQ8N584 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39CQ8N584 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39CQ8N584 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TTC39CQ8N584 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39CQ8N584 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39CQ8N584 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.61■■□□□ 1.05
TTC39CQ8N584 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.61■■□□□ 1.05
TTC39CQ8N584 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39CQ8N584 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.61■■□□□ 1.05
TTC39CQ8N584 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39CQ8N584 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39CQ8N584 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.6■■□□□ 1.05
TTC39CQ8N584 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39CQ8N584 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TTC39CQ8N584 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.6■■□□□ 1.05
TTC39CQ8N584 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39CQ8N584 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39CQ8N584 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39CQ8N584 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39CQ8N584 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.6■■□□□ 1.05
TTC39CQ8N584 AC069152.1-201ENST00000438030 544 ntBASIC21.6■■□□□ 1.05
TTC39CQ8N584 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.6■■□□□ 1.05
TTC39CQ8N584 AC097658.1-201ENST00000475555 843 ntBASIC21.6■■□□□ 1.05
TTC39CQ8N584 AC091874.3-201ENST00000512672 1195 ntBASIC21.6■■□□□ 1.05
TTC39CQ8N584 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39CQ8N584 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39CQ8N584 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39CQ8N584 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TTC39CQ8N584 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39CQ8N584 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 DUSP5P2-201ENST00000426873 1033 ntBASIC21.59■■□□□ 1.05
TTC39CQ8N584 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39CQ8N584 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.59■■□□□ 1.05
TTC39CQ8N584 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.58■■□□□ 1.05
TTC39CQ8N584 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39CQ8N584 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39CQ8N584 GABARAPL3-202ENST00000624044 1851 ntBASIC21.58■■□□□ 1.05
TTC39CQ8N584 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39CQ8N584 FEM1AP1-201ENST00000431297 1995 ntBASIC21.58■■□□□ 1.05
TTC39CQ8N584 AP005212.1-201ENST00000581547 1997 ntBASIC21.58■■□□□ 1.05
TTC39CQ8N584 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39CQ8N584 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TTC39CQ8N584 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.58■■□□□ 1.05
TTC39CQ8N584 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.58■■□□□ 1.05
TTC39CQ8N584 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39CQ8N584 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39CQ8N584 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39CQ8N584 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.58■■□□□ 1.05
TTC39CQ8N584 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39CQ8N584 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.58■■□□□ 1.05
TTC39CQ8N584 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.58■■□□□ 1.05
TTC39CQ8N584 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
TTC39CQ8N584 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TTC39CQ8N584 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.58■■□□□ 1.04
TTC39CQ8N584 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TTC39CQ8N584 AC020907.5-201ENST00000624372 1936 ntBASIC21.58■■□□□ 1.04
TTC39CQ8N584 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TTC39CQ8N584 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.58■■□□□ 1.04
TTC39CQ8N584 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TTC39CQ8N584 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TTC39CQ8N584 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39CQ8N584 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39CQ8N584 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39CQ8N584 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39CQ8N584 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39CQ8N584 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 MYC-209ENST00000641252 345 ntBASIC21.57■■□□□ 1.04
TTC39CQ8N584 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39CQ8N584 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TTC39CQ8N584 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.57■■□□□ 1.04
TTC39CQ8N584 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms