Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
VPS8Q8N3P4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 PRORSD1P-201ENST00000295112 541 ntBASIC31.92■■■□□ 2.7
VPS8Q8N3P4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 UNC93B4-201ENST00000505679 747 ntBASIC31.92■■■□□ 2.7
VPS8Q8N3P4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS8Q8N3P4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC31.91■■■□□ 2.7
VPS8Q8N3P4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
VPS8Q8N3P4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC31.91■■■□□ 2.7
VPS8Q8N3P4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC31.91■■■□□ 2.7
VPS8Q8N3P4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC31.91■■■□□ 2.7
VPS8Q8N3P4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
VPS8Q8N3P4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC31.91■■■□□ 2.7
VPS8Q8N3P4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 FAM201B-201ENST00000458407 597 ntBASIC31.9■■■□□ 2.7
VPS8Q8N3P4 AC023632.3-201ENST00000521633 145 ntBASIC31.9■■■□□ 2.7
VPS8Q8N3P4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 AC233263.1-201ENST00000578059 224 ntBASIC31.9■■■□□ 2.7
VPS8Q8N3P4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
VPS8Q8N3P4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 AL137060.1-201ENST00000618151 2648 ntBASIC31.89■■■□□ 2.7
VPS8Q8N3P4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC31.89■■■□□ 2.7
VPS8Q8N3P4 AC069544.1-201ENST00000609399 999 ntBASIC31.89■■■□□ 2.7
VPS8Q8N3P4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC31.89■■■□□ 2.69
VPS8Q8N3P4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 H19-201ENST00000411754 1788 ntTSL 5 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 AC006058.3-201ENST00000606217 1069 ntBASIC31.88■■■□□ 2.69
VPS8Q8N3P4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC31.88■■■□□ 2.69
VPS8Q8N3P4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
VPS8Q8N3P4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC31.86■■■□□ 2.69
VPS8Q8N3P4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
VPS8Q8N3P4 HES2-206ENST00000489730 730 ntTSL 2 BASIC31.86■■■□□ 2.69
VPS8Q8N3P4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
VPS8Q8N3P4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC31.86■■■□□ 2.69
VPS8Q8N3P4 AC073648.6-201ENST00000641589 218 ntBASIC31.86■■■□□ 2.69
VPS8Q8N3P4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
VPS8Q8N3P4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms