Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01561Q8N1V8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 AFG3L1P-217ENST00000557444 2447 ntBASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 FAM21FP-204ENST00000608637 956 ntBASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 AC243732.1-201ENST00000612648 864 ntBASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01561Q8N1V8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 DUX4L2-201ENST00000561772 1275 ntBASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 DUX4L6-201ENST00000626483 1275 ntBASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 DUX4L1-201ENST00000627662 1275 ntBASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 DUX4L8-201ENST00000629013 1275 ntBASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 DUX4L3-201ENST00000630187 1275 ntBASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 DUX4L7-201ENST00000630678 1275 ntBASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 DUX4L5-201ENST00000630834 1275 ntBASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01561Q8N1V8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms