Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK3Q8IV63 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VRK3Q8IV63 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK3Q8IV63 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 MIPEPP3-201ENST00000412105 444 ntBASIC19.9■□□□□ 0.78
VRK3Q8IV63 PGM5P4-201ENST00000421970 445 ntBASIC19.9■□□□□ 0.78
VRK3Q8IV63 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VRK3Q8IV63 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK3Q8IV63 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK3Q8IV63 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK3Q8IV63 AC092720.2-201ENST00000602388 1665 ntBASIC19.9■□□□□ 0.78
VRK3Q8IV63 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VRK3Q8IV63 GABARAPL3-202ENST00000624044 1851 ntBASIC19.9■□□□□ 0.78
VRK3Q8IV63 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK3Q8IV63 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.9■□□□□ 0.78
VRK3Q8IV63 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.89■□□□□ 0.77
VRK3Q8IV63 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.89■□□□□ 0.77
VRK3Q8IV63 AC104771.1-201ENST00000603335 964 ntBASIC19.89■□□□□ 0.77
VRK3Q8IV63 AL109923.1-201ENST00000618799 583 ntBASIC19.89■□□□□ 0.77
VRK3Q8IV63 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.89■□□□□ 0.77
VRK3Q8IV63 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK3Q8IV63 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.88■□□□□ 0.77
VRK3Q8IV63 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.88■□□□□ 0.77
VRK3Q8IV63 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VRK3Q8IV63 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VRK3Q8IV63 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VRK3Q8IV63 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.88■□□□□ 0.77
VRK3Q8IV63 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
VRK3Q8IV63 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.88■□□□□ 0.77
VRK3Q8IV63 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.88■□□□□ 0.77
VRK3Q8IV63 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VRK3Q8IV63 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VRK3Q8IV63 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.88■□□□□ 0.77
VRK3Q8IV63 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 AL512408.1-201ENST00000569378 2000 ntBASIC19.87■□□□□ 0.77
VRK3Q8IV63 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.87■□□□□ 0.77
VRK3Q8IV63 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 HLA-L-209ENST00000420110 1011 ntBASIC19.87■□□□□ 0.77
VRK3Q8IV63 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.87■□□□□ 0.77
VRK3Q8IV63 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.87■□□□□ 0.77
VRK3Q8IV63 AL138781.1-201ENST00000566567 1274 ntBASIC19.87■□□□□ 0.77
VRK3Q8IV63 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.87■□□□□ 0.77
VRK3Q8IV63 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.87■□□□□ 0.77
VRK3Q8IV63 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK3Q8IV63 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VRK3Q8IV63 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.86■□□□□ 0.77
VRK3Q8IV63 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.86■□□□□ 0.77
VRK3Q8IV63 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK3Q8IV63 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VRK3Q8IV63 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VRK3Q8IV63 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.86■□□□□ 0.77
VRK3Q8IV63 SLC29A4P1-201ENST00000398760 971 ntBASIC19.86■□□□□ 0.77
VRK3Q8IV63 LSM12P1-201ENST00000411836 588 ntBASIC19.86■□□□□ 0.77
VRK3Q8IV63 AC098934.4-201ENST00000564127 592 ntBASIC19.86■□□□□ 0.77
VRK3Q8IV63 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK3Q8IV63 AL589743.5-201ENST00000616611 1050 ntBASIC19.86■□□□□ 0.77
VRK3Q8IV63 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK3Q8IV63 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.86■□□□□ 0.77
VRK3Q8IV63 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK3Q8IV63 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK3Q8IV63 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK3Q8IV63 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK3Q8IV63 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
VRK3Q8IV63 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK3Q8IV63 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VRK3Q8IV63 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VRK3Q8IV63 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK3Q8IV63 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK3Q8IV63 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
VRK3Q8IV63 LINC01521-201ENST00000504184 1943 ntBASIC19.85■□□□□ 0.77
VRK3Q8IV63 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms