Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.88■□□□□ 0.45
RTTNQ86VV8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTTNQ86VV8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTTNQ86VV8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 SLC29A4P1-201ENST00000398760 971 ntBASIC17.87■□□□□ 0.45
RTTNQ86VV8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 AL138781.1-201ENST00000566567 1274 ntBASIC17.87■□□□□ 0.45
RTTNQ86VV8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTTNQ86VV8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTTNQ86VV8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTTNQ86VV8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTTNQ86VV8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 AL355472.2-201ENST00000422958 438 ntBASIC17.87■□□□□ 0.45
RTTNQ86VV8 AC007322.1-201ENST00000426983 750 ntBASIC17.87■□□□□ 0.45
RTTNQ86VV8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 AC016405.3-201ENST00000607710 860 ntBASIC17.87■□□□□ 0.45
RTTNQ86VV8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.87■□□□□ 0.45
RTTNQ86VV8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTTNQ86VV8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTTNQ86VV8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 AC007225.1-201ENST00000566331 1836 ntBASIC17.86■□□□□ 0.45
RTTNQ86VV8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 AC083906.2-201ENST00000511578 360 ntBASIC17.86■□□□□ 0.45
RTTNQ86VV8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.86■□□□□ 0.45
RTTNQ86VV8 AC231657.2-201ENST00000624556 255 ntBASIC17.86■□□□□ 0.45
RTTNQ86VV8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTTNQ86VV8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.85■□□□□ 0.45
RTTNQ86VV8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RTTNQ86VV8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTTNQ86VV8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTTNQ86VV8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTTNQ86VV8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTTNQ86VV8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTTNQ86VV8 AC073130.3-201ENST00000624389 2278 ntBASIC17.85■□□□□ 0.45
RTTNQ86VV8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RTTNQ86VV8 AFG3L1P-217ENST00000557444 2447 ntBASIC17.85■□□□□ 0.45
RTTNQ86VV8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTTNQ86VV8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTTNQ86VV8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTTNQ86VV8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTTNQ86VV8 FEM1AP1-201ENST00000431297 1995 ntBASIC17.85■□□□□ 0.45
RTTNQ86VV8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTTNQ86VV8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTTNQ86VV8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTTNQ86VV8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 AC098934.4-201ENST00000564127 592 ntBASIC17.84■□□□□ 0.45
RTTNQ86VV8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTTNQ86VV8 AC005181.1-201ENST00000604782 1256 ntBASIC17.84■□□□□ 0.45
RTTNQ86VV8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms