Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MIPEPP3-201ENST00000412105 444 ntBASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 PGM5P4-201ENST00000421970 445 ntBASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYSMD3Q7Z3D4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYSMD3Q7Z3D4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 KRT8P36-201ENST00000489121 1440 ntBASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 AL138781.1-201ENST00000566567 1274 ntBASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 AC105020.6-201ENST00000621523 1217 ntBASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.4■□□□□ 0.86
LYSMD3Q7Z3D4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.39■□□□□ 0.86
LYSMD3Q7Z3D4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LYSMD3Q7Z3D4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 AL355802.2-201ENST00000402069 882 ntBASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 LSM12P1-201ENST00000411836 588 ntBASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LYSMD3Q7Z3D4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 AC098934.4-201ENST00000564127 592 ntBASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 AL589743.5-201ENST00000616611 1050 ntBASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LYSMD3Q7Z3D4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.37■□□□□ 0.85
LYSMD3Q7Z3D4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms