Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 MKRN4P-201ENST00000444706 1521 ntBASIC13.36□□□□□ -0.27
SCXQ7RTU7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SCXQ7RTU7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 AC069236.1-201ENST00000604339 616 ntBASIC13.35□□□□□ -0.27
SCXQ7RTU7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 TMEM191A-211ENST00000637163 1067 ntBASIC13.35□□□□□ -0.27
SCXQ7RTU7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SCXQ7RTU7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCXQ7RTU7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 AF106564.1-201ENST00000607058 2553 ntBASIC13.34□□□□□ -0.27
SCXQ7RTU7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 KRT16P2-201ENST00000414673 1423 ntBASIC13.34□□□□□ -0.27
SCXQ7RTU7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 MIR4758-201ENST00000577688 71 ntBASIC13.34□□□□□ -0.27
SCXQ7RTU7 AC016405.3-201ENST00000607710 860 ntBASIC13.34□□□□□ -0.27
SCXQ7RTU7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 OR10C1-204ENST00000622521 1039 ntBASIC13.34□□□□□ -0.27
SCXQ7RTU7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms