Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 AC105020.6-201ENST00000621523 1217 ntBASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
COLCA1Q6ZS62 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
COLCA1Q6ZS62 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COLCA1Q6ZS62 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COLCA1Q6ZS62 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COLCA1Q6ZS62 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COLCA1Q6ZS62 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COLCA1Q6ZS62 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COLCA1Q6ZS62 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COLCA1Q6ZS62 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 PKD1P6-201ENST00000343738 4769 ntBASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 CROCCP5-201ENST00000436658 830 ntBASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 AC093787.1-201ENST00000450396 207 ntBASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 AC073130.3-201ENST00000624389 2278 ntBASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COLCA1Q6ZS62 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.5■□□□□ 0.39
COLCA1Q6ZS62 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
COLCA1Q6ZS62 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms