Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 AC010980.2-201ENST00000587099 1412 ntBASIC18.99■□□□□ 0.63
RTL4Q6ZR62 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 AC069152.1-201ENST00000438030 544 ntBASIC18.98■□□□□ 0.63
RTL4Q6ZR62 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTL4Q6ZR62 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 BX276092.2-201ENST00000417668 665 ntBASIC18.97■□□□□ 0.63
RTL4Q6ZR62 AC073210.2-201ENST00000430369 194 ntBASIC18.97■□□□□ 0.63
RTL4Q6ZR62 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTL4Q6ZR62 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 LINC01521-201ENST00000504184 1943 ntBASIC18.96■□□□□ 0.63
RTL4Q6ZR62 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 AC092118.2-201ENST00000613495 667 ntBASIC18.96■□□□□ 0.63
RTL4Q6ZR62 AC100791.3-201ENST00000617619 330 ntBASIC18.96■□□□□ 0.63
RTL4Q6ZR62 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 AC116050.2-201ENST00000612102 1779 ntBASIC18.96■□□□□ 0.63
RTL4Q6ZR62 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
RTL4Q6ZR62 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 AL157384.1-201ENST00000445995 2473 ntBASIC18.95■□□□□ 0.62
RTL4Q6ZR62 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTL4Q6ZR62 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms