Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 TMEM179-206ENST00000616017 1645 ntBASIC12.85□□□□□ -0.35
LINC00575Q6W349 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 AC026471.1-201ENST00000564629 3026 ntBASIC12.85□□□□□ -0.35
LINC00575Q6W349 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 KRT125P-201ENST00000546827 989 ntBASIC12.85□□□□□ -0.35
LINC00575Q6W349 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00575Q6W349 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00575Q6W349 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 HSD17B1P1-201ENST00000590052 955 ntBASIC12.84□□□□□ -0.35
LINC00575Q6W349 AC099791.2-201ENST00000605725 427 ntBASIC12.84□□□□□ -0.35
LINC00575Q6W349 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 AC093484.2-201ENST00000580996 2166 ntBASIC12.84□□□□□ -0.35
LINC00575Q6W349 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 H19-201ENST00000411754 1788 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00575Q6W349 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00575Q6W349 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00575Q6W349 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
LINC00575Q6W349 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
LINC00575Q6W349 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC12.83□□□□□ -0.35
LINC00575Q6W349 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 LETM1P2-201ENST00000597330 2178 ntBASIC12.83□□□□□ -0.36
LINC00575Q6W349 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00575Q6W349 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00575Q6W349 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms