Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CASC1Q6TDU7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CASC1Q6TDU7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 NTF6G-201ENST00000591094 616 ntBASIC24.8■■□□□ 1.56
CASC1Q6TDU7 MIR5787-201ENST00000611784 55 ntBASIC24.8■■□□□ 1.56
CASC1Q6TDU7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.8■■□□□ 1.56
CASC1Q6TDU7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 CDV3P1-201ENST00000471403 739 ntBASIC24.79■■□□□ 1.56
CASC1Q6TDU7 FAM21FP-204ENST00000608637 956 ntBASIC24.79■■□□□ 1.56
CASC1Q6TDU7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CASC1Q6TDU7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 AIRN-201ENST00000601203 4374 ntBASIC24.78■■□□□ 1.56
CASC1Q6TDU7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.78■■□□□ 1.56
CASC1Q6TDU7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 AC099778.1-201ENST00000568593 1911 ntBASIC24.77■■□□□ 1.56
CASC1Q6TDU7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CASC1Q6TDU7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 KRT18P61-201ENST00000585825 1298 ntBASIC24.76■■□□□ 1.55
CASC1Q6TDU7 UBE2DNL-204ENST00000602536 740 ntBASIC24.76■■□□□ 1.55
CASC1Q6TDU7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CASC1Q6TDU7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.75■■□□□ 1.55
CASC1Q6TDU7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.75■■□□□ 1.55
CASC1Q6TDU7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CASC1Q6TDU7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms