Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 PTBP1P-201ENST00000554374 1601 ntBASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
FOXR2Q6PJQ5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 AC016769.1-201ENST00000409132 1010 ntBASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.15■■□□□ 1.14
FOXR2Q6PJQ5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
FOXR2Q6PJQ5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.14■■□□□ 1.14
FOXR2Q6PJQ5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
FOXR2Q6PJQ5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
FOXR2Q6PJQ5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.14■■□□□ 1.14
FOXR2Q6PJQ5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
FOXR2Q6PJQ5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
FOXR2Q6PJQ5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.14■■□□□ 1.14
FOXR2Q6PJQ5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 AC011767.1-201ENST00000617410 1153 ntBASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 AC231657.2-201ENST00000624556 255 ntBASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR2Q6PJQ5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
FOXR2Q6PJQ5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.13■■□□□ 1.13
FOXR2Q6PJQ5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
FOXR2Q6PJQ5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.13■■□□□ 1.13
FOXR2Q6PJQ5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXR2Q6PJQ5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
FOXR2Q6PJQ5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXR2Q6PJQ5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.13■■□□□ 1.13
FOXR2Q6PJQ5 TMEM179-206ENST00000616017 1645 ntBASIC22.13■■□□□ 1.13
FOXR2Q6PJQ5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR2Q6PJQ5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms