Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AL137060.1-201ENST00000618151 2648 ntBASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF40BQ6NWY9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 MIR4785-201ENST00000585005 73 ntBASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40BQ6NWY9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
PRPF40BQ6NWY9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 AP001412.1-201ENST00000608405 714 ntBASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 AC113410.3-201ENST00000623366 203 ntBASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40BQ6NWY9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.5■■□□□ 1.67
PRPF40BQ6NWY9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 AC120498.8-201ENST00000614275 531 ntBASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PRPF40BQ6NWY9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 AL135905.2-201ENST00000584934 1404 ntBASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 RCN1P1-201ENST00000400413 996 ntBASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 AC012306.2-201ENST00000609350 630 ntBASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 AC110285.5-201ENST00000611501 352 ntBASIC25.48■■□□□ 1.67
PRPF40BQ6NWY9 AC097493.4-201ENST00000641197 219 ntBASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms