Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
KRT40Q6A162 AC069152.1-201ENST00000438030 544 ntBASIC23.53■■□□□ 1.36
KRT40Q6A162 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.53■■□□□ 1.36
KRT40Q6A162 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.53■■□□□ 1.36
KRT40Q6A162 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT40Q6A162 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.52■■□□□ 1.36
KRT40Q6A162 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
KRT40Q6A162 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 KRT8P36-201ENST00000489121 1440 ntBASIC23.52■■□□□ 1.36
KRT40Q6A162 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
KRT40Q6A162 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
KRT40Q6A162 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.52■■□□□ 1.36
KRT40Q6A162 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.52■■□□□ 1.36
KRT40Q6A162 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.52■■□□□ 1.36
KRT40Q6A162 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
KRT40Q6A162 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.52■■□□□ 1.36
KRT40Q6A162 AL162377.1-201ENST00000618844 1793 ntBASIC23.52■■□□□ 1.36
KRT40Q6A162 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT40Q6A162 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
KRT40Q6A162 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.52■■□□□ 1.36
KRT40Q6A162 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.35
KRT40Q6A162 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
KRT40Q6A162 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.51■■□□□ 1.35
KRT40Q6A162 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.51■■□□□ 1.35
KRT40Q6A162 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.51■■□□□ 1.35
KRT40Q6A162 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.51■■□□□ 1.35
KRT40Q6A162 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.51■■□□□ 1.35
KRT40Q6A162 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.51■■□□□ 1.35
KRT40Q6A162 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
KRT40Q6A162 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT40Q6A162 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
KRT40Q6A162 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.5■■□□□ 1.35
KRT40Q6A162 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
KRT40Q6A162 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
KRT40Q6A162 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.5■■□□□ 1.35
KRT40Q6A162 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
KRT40Q6A162 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.5■■□□□ 1.35
KRT40Q6A162 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.5■■□□□ 1.35
KRT40Q6A162 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
KRT40Q6A162 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT40Q6A162 CYP21A1P-202ENST00000354927 1481 ntBASIC23.49■■□□□ 1.35
KRT40Q6A162 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT40Q6A162 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT40Q6A162 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT40Q6A162 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
KRT40Q6A162 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.49■■□□□ 1.35
KRT40Q6A162 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.49■■□□□ 1.35
KRT40Q6A162 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.49■■□□□ 1.35
KRT40Q6A162 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.49■■□□□ 1.35
KRT40Q6A162 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT40Q6A162 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.49■■□□□ 1.35
KRT40Q6A162 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.49■■□□□ 1.35
KRT40Q6A162 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT40Q6A162 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT40Q6A162 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.49■■□□□ 1.35
KRT40Q6A162 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
KRT40Q6A162 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
KRT40Q6A162 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT40Q6A162 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.48■■□□□ 1.35
KRT40Q6A162 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
KRT40Q6A162 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.48■■□□□ 1.35
KRT40Q6A162 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KRT40Q6A162 RARRES2P4-201ENST00000514074 484 ntBASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms