Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 MIR574-201ENST00000385209 96 ntBASIC10.97□□□□□ -0.65
RNF213Q63HN8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 F2R-202ENST00000505600 442 ntTSL 2 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RNF213Q63HN8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC10.97□□□□□ -0.65
RNF213Q63HN8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC10.96□□□□□ -0.65
RNF213Q63HN8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RNF213Q63HN8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RNF213Q63HN8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RNF213Q63HN8 AC245052.3-201ENST00000450182 901 ntBASIC10.96□□□□□ -0.65
RNF213Q63HN8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC10.96□□□□□ -0.65
RNF213Q63HN8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RNF213Q63HN8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
RNF213Q63HN8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.96□□□□□ -0.65
RNF213Q63HN8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.96□□□□□ -0.65
RNF213Q63HN8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RNF213Q63HN8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RNF213Q63HN8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC10.96□□□□□ -0.66
RNF213Q63HN8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC10.96□□□□□ -0.66
RNF213Q63HN8 AC092865.5-201ENST00000545435 363 ntBASIC10.96□□□□□ -0.66
RNF213Q63HN8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
RNF213Q63HN8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC10.96□□□□□ -0.66
RNF213Q63HN8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC10.96□□□□□ -0.66
RNF213Q63HN8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC10.96□□□□□ -0.66
RNF213Q63HN8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC10.96□□□□□ -0.66
RNF213Q63HN8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RNF213Q63HN8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 HLA-J-203ENST00000494367 1087 ntBASIC10.95□□□□□ -0.66
RNF213Q63HN8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 NBPF21P-201ENST00000425093 1451 ntBASIC10.95□□□□□ -0.66
RNF213Q63HN8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 PRELID1P1-202ENST00000567272 903 ntBASIC10.95□□□□□ -0.66
RNF213Q63HN8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 MIR3652-201ENST00000579335 131 ntBASIC10.95□□□□□ -0.66
RNF213Q63HN8 AC117500.6-201ENST00000624871 588 ntBASIC10.95□□□□□ -0.66
RNF213Q63HN8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RNF213Q63HN8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC10.95□□□□□ -0.66
RNF213Q63HN8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RNF213Q63HN8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC10.94□□□□□ -0.66
RNF213Q63HN8 SLC25A6P4-201ENST00000586535 553 ntBASIC10.94□□□□□ -0.66
RNF213Q63HN8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms