Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 AL136116.3-201ENST00000402907 1138 ntBASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 AC008764.7-201ENST00000593779 1081 ntBASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 RARRES2P11-201ENST00000635158 484 ntBASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 AC099791.1-201ENST00000416440 715 ntBASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 AL136162.1-201ENST00000607711 1078 ntBASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
LINC00242Q5T6M2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 AC245052.3-201ENST00000450182 901 ntBASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 AC135279.3-201ENST00000610945 1311 ntBASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00242Q5T6M2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 MIR572-201ENST00000384983 95 ntBASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00242Q5T6M2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms