Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
KHDC1Q4VXA5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 AC005181.1-201ENST00000604782 1256 ntBASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
KHDC1Q4VXA5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
KHDC1Q4VXA5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
KHDC1Q4VXA5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.52■□□□□ 0.87
KHDC1Q4VXA5 AL049796.1-201ENST00000565336 1766 ntBASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 AC016405.3-201ENST00000607710 860 ntBASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 GABARAPL3-202ENST00000624044 1851 ntBASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KHDC1Q4VXA5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 CYP2T1P-201ENST00000432607 1285 ntBASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KHDC1Q4VXA5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.49■□□□□ 0.87
KHDC1Q4VXA5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 AC006970.2-201ENST00000450065 779 ntBASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 AL591742.1-201ENST00000604433 565 ntBASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 AP005212.1-201ENST00000581547 1997 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms