Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC105233.4-201ENST00000642045 216 ntBASIC18.1■□□□□ 0.49
CCDC58Q4VC31 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC58Q4VC31 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC58Q4VC31 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC58Q4VC31 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC58Q4VC31 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC58Q4VC31 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC58Q4VC31 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC58Q4VC31 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCDC58Q4VC31 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC58Q4VC31 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC58Q4VC31 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC58Q4VC31 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CCDC58Q4VC31 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC58Q4VC31 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC58Q4VC31 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC58Q4VC31 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC58Q4VC31 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 TCF3P1-201ENST00000423021 1937 ntBASIC18.06■□□□□ 0.48
CCDC58Q4VC31 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 BX323043.1-201ENST00000641006 1765 ntBASIC18.06■□□□□ 0.48
CCDC58Q4VC31 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC58Q4VC31 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 AC061975.6-201ENST00000579045 1553 ntBASIC18.05■□□□□ 0.48
CCDC58Q4VC31 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC58Q4VC31 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms