Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.15■□□□□ 0.82
SF3A2Q15428 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.15■□□□□ 0.82
SF3A2Q15428 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.15■□□□□ 0.82
SF3A2Q15428 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SF3A2Q15428 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SF3A2Q15428 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SF3A2Q15428 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SF3A2Q15428 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SF3A2Q15428 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.14■□□□□ 0.81
SF3A2Q15428 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.14■□□□□ 0.81
SF3A2Q15428 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.14■□□□□ 0.81
SF3A2Q15428 AC145285.6-201ENST00000604632 637 ntBASIC20.14■□□□□ 0.81
SF3A2Q15428 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.14■□□□□ 0.81
SF3A2Q15428 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SF3A2Q15428 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.14■□□□□ 0.81
SF3A2Q15428 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SF3A2Q15428 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SF3A2Q15428 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SF3A2Q15428 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.13■□□□□ 0.81
SF3A2Q15428 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.13■□□□□ 0.81
SF3A2Q15428 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SF3A2Q15428 KRT18P57-201ENST00000443599 1254 ntBASIC20.13■□□□□ 0.81
SF3A2Q15428 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SF3A2Q15428 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.13■□□□□ 0.81
SF3A2Q15428 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.13■□□□□ 0.81
SF3A2Q15428 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.13■□□□□ 0.81
SF3A2Q15428 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.13■□□□□ 0.81
SF3A2Q15428 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.13■□□□□ 0.81
SF3A2Q15428 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SF3A2Q15428 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.12■□□□□ 0.81
SF3A2Q15428 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.12■□□□□ 0.81
SF3A2Q15428 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 KRT8P9-201ENST00000558927 1449 ntBASIC20.12■□□□□ 0.81
SF3A2Q15428 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.12■□□□□ 0.81
SF3A2Q15428 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SF3A2Q15428 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SF3A2Q15428 AL390719.1-204ENST00000412397 1219 ntBASIC20.12■□□□□ 0.81
SF3A2Q15428 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.12■□□□□ 0.81
SF3A2Q15428 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.12■□□□□ 0.81
SF3A2Q15428 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.12■□□□□ 0.81
SF3A2Q15428 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.12■□□□□ 0.81
SF3A2Q15428 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SF3A2Q15428 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.12■□□□□ 0.81
SF3A2Q15428 AF186192.3-201ENST00000583427 947 ntBASIC20.12■□□□□ 0.81
SF3A2Q15428 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.12■□□□□ 0.81
SF3A2Q15428 AC127496.7-201ENST00000625110 1798 ntBASIC20.12■□□□□ 0.81
SF3A2Q15428 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SF3A2Q15428 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SF3A2Q15428 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SF3A2Q15428 AC026471.6-201ENST00000622954 1905 ntBASIC20.12■□□□□ 0.81
SF3A2Q15428 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.11■□□□□ 0.81
SF3A2Q15428 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.11■□□□□ 0.81
SF3A2Q15428 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SF3A2Q15428 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.11■□□□□ 0.81
SF3A2Q15428 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.11■□□□□ 0.81
SF3A2Q15428 FAM197Y1-201ENST00000421178 764 ntBASIC20.11■□□□□ 0.81
SF3A2Q15428 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.11■□□□□ 0.81
SF3A2Q15428 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.11■□□□□ 0.81
SF3A2Q15428 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.11■□□□□ 0.81
SF3A2Q15428 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SF3A2Q15428 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SF3A2Q15428 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.11■□□□□ 0.81
SF3A2Q15428 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SF3A2Q15428 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.11■□□□□ 0.81
SF3A2Q15428 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SF3A2Q15428 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SF3A2Q15428 HTR7P1-201ENST00000538670 1336 ntBASIC20.1■□□□□ 0.81
SF3A2Q15428 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SF3A2Q15428 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms