Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDH1Q08174 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH1Q08174 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH1Q08174 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH1Q08174 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDH1Q08174 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH1Q08174 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH1Q08174 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDH1Q08174 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDH1Q08174 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDH1Q08174 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH1Q08174 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDH1Q08174 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDH1Q08174 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH1Q08174 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDH1Q08174 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDH1Q08174 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH1Q08174 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH1Q08174 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH1Q08174 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH1Q08174 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH1Q08174 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH1Q08174 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH1Q08174 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PCDH1Q08174 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH1Q08174 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH1Q08174 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PCDH1Q08174 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH1Q08174 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH1Q08174 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH1Q08174 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PCDH1Q08174 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH1Q08174 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDH1Q08174 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDH1Q08174 AL356652.1-201ENST00000615962 565 ntBASIC19.59■□□□□ 0.73
PCDH1Q08174 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH1Q08174 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH1Q08174 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH1Q08174 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH1Q08174 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PCDH1Q08174 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH1Q08174 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH1Q08174 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDH1Q08174 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH1Q08174 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH1Q08174 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH1Q08174 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDH1Q08174 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH1Q08174 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDH1Q08174 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
PCDH1Q08174 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCDH1Q08174 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH1Q08174 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PCDH1Q08174 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDH1Q08174 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDH1Q08174 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDH1Q08174 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH1Q08174 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
PCDH1Q08174 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH1Q08174 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH1Q08174 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH1Q08174 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDH1Q08174 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH1Q08174 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PCDH1Q08174 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 MCRIP2P1-201ENST00000394346 511 ntBASIC19.57■□□□□ 0.72
PCDH1Q08174 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH1Q08174 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH1Q08174 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH1Q08174 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH1Q08174 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH1Q08174 AC092437.1-201ENST00000624794 1048 ntBASIC19.57■□□□□ 0.72
PCDH1Q08174 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDH1Q08174 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDH1Q08174 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH1Q08174 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH1Q08174 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH1Q08174 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDH1Q08174 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH1Q08174 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PCDH1Q08174 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDH1Q08174 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH1Q08174 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH1Q08174 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDH1Q08174 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH1Q08174 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDH1Q08174 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDH1Q08174 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms