Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.11■□□□□ 0.33
COL10A1Q03692 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL10A1Q03692 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COL10A1Q03692 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
COL10A1Q03692 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COL10A1Q03692 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COL10A1Q03692 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 CNN2P6-201ENST00000439038 900 ntBASIC17.1■□□□□ 0.33
COL10A1Q03692 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.1■□□□□ 0.33
COL10A1Q03692 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.1■□□□□ 0.33
COL10A1Q03692 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.1■□□□□ 0.33
COL10A1Q03692 IKBKGP1-201ENST00000612193 1073 ntBASIC17.1■□□□□ 0.33
COL10A1Q03692 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.1■□□□□ 0.33
COL10A1Q03692 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.1■□□□□ 0.33
COL10A1Q03692 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.1■□□□□ 0.33
COL10A1Q03692 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COL10A1Q03692 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL10A1Q03692 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COL10A1Q03692 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL10A1Q03692 AC020907.5-201ENST00000624372 1936 ntBASIC17.09■□□□□ 0.33
COL10A1Q03692 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL10A1Q03692 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COL10A1Q03692 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COL10A1Q03692 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL10A1Q03692 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.09■□□□□ 0.33
COL10A1Q03692 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COL10A1Q03692 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COL10A1Q03692 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COL10A1Q03692 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL10A1Q03692 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL10A1Q03692 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.09■□□□□ 0.33
COL10A1Q03692 AL162412.1-201ENST00000567129 965 ntBASIC17.09■□□□□ 0.33
COL10A1Q03692 AC016405.3-201ENST00000607710 860 ntBASIC17.09■□□□□ 0.33
COL10A1Q03692 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.09■□□□□ 0.33
COL10A1Q03692 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.09■□□□□ 0.33
COL10A1Q03692 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL10A1Q03692 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.09■□□□□ 0.33
COL10A1Q03692 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.09■□□□□ 0.33
COL10A1Q03692 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.09■□□□□ 0.33
COL10A1Q03692 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.09■□□□□ 0.33
COL10A1Q03692 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL10A1Q03692 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL10A1Q03692 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
COL10A1Q03692 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
COL10A1Q03692 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COL10A1Q03692 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL10A1Q03692 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL10A1Q03692 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COL10A1Q03692 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
COL10A1Q03692 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL10A1Q03692 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL10A1Q03692 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.08■□□□□ 0.32
COL10A1Q03692 AC068338.2-201ENST00000563278 1430 ntBASIC17.08■□□□□ 0.32
COL10A1Q03692 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL10A1Q03692 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.08■□□□□ 0.32
COL10A1Q03692 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL10A1Q03692 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL10A1Q03692 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL10A1Q03692 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL10A1Q03692 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL10A1Q03692 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.08■□□□□ 0.32
COL10A1Q03692 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
COL10A1Q03692 AC231657.2-201ENST00000624556 255 ntBASIC17.08■□□□□ 0.32
COL10A1Q03692 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
COL10A1Q03692 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
COL10A1Q03692 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL10A1Q03692 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL10A1Q03692 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.08■□□□□ 0.32
COL10A1Q03692 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
COL10A1Q03692 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL10A1Q03692 AC092720.2-201ENST00000602388 1665 ntBASIC17.07■□□□□ 0.32
COL10A1Q03692 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL10A1Q03692 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL10A1Q03692 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.07■□□□□ 0.32
COL10A1Q03692 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.07■□□□□ 0.32
COL10A1Q03692 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.07■□□□□ 0.32
COL10A1Q03692 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL10A1Q03692 AC007322.1-201ENST00000426983 750 ntBASIC17.07■□□□□ 0.32
COL10A1Q03692 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
COL10A1Q03692 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.07■□□□□ 0.32
COL10A1Q03692 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.07■□□□□ 0.32
COL10A1Q03692 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.07■□□□□ 0.32
COL10A1Q03692 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL10A1Q03692 AC092437.1-201ENST00000624794 1048 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms