Protein–RNA interactions for Protein: P63027

VAMP2, Vesicle-associated membrane protein 2, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2P63027 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAMP2P63027 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.67■□□□□ 0.26
VAMP2P63027 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
VAMP2P63027 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.67■□□□□ 0.26
VAMP2P63027 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.67■□□□□ 0.26
VAMP2P63027 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.67■□□□□ 0.26
VAMP2P63027 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAMP2P63027 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAMP2P63027 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VAMP2P63027 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAMP2P63027 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAMP2P63027 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.67■□□□□ 0.26
VAMP2P63027 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAMP2P63027 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.67■□□□□ 0.26
VAMP2P63027 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
VAMP2P63027 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAMP2P63027 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VAMP2P63027 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAMP2P63027 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VAMP2P63027 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAMP2P63027 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAMP2P63027 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VAMP2P63027 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAMP2P63027 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAMP2P63027 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.66■□□□□ 0.26
VAMP2P63027 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.66■□□□□ 0.26
VAMP2P63027 AC239859.2-201ENST00000444165 318 ntBASIC16.66■□□□□ 0.26
VAMP2P63027 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
VAMP2P63027 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.66■□□□□ 0.26
VAMP2P63027 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VAMP2P63027 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAMP2P63027 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VAMP2P63027 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.65■□□□□ 0.26
VAMP2P63027 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 TCF3P1-201ENST00000423021 1937 ntBASIC16.65■□□□□ 0.26
VAMP2P63027 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.65■□□□□ 0.26
VAMP2P63027 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.65■□□□□ 0.26
VAMP2P63027 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VAMP2P63027 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
VAMP2P63027 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAMP2P63027 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.64■□□□□ 0.26
VAMP2P63027 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VAMP2P63027 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VAMP2P63027 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
VAMP2P63027 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VAMP2P63027 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.64■□□□□ 0.25
VAMP2P63027 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
VAMP2P63027 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 AP005435.1-201ENST00000529293 1178 ntBASIC16.64■□□□□ 0.25
VAMP2P63027 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VAMP2P63027 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VAMP2P63027 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.64■□□□□ 0.25
VAMP2P63027 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.64■□□□□ 0.25
VAMP2P63027 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.64■□□□□ 0.25
VAMP2P63027 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAMP2P63027 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAMP2P63027 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
VAMP2P63027 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
VAMP2P63027 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAMP2P63027 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAMP2P63027 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAMP2P63027 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VAMP2P63027 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAMP2P63027 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.63■□□□□ 0.25
VAMP2P63027 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
VAMP2P63027 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.63■□□□□ 0.25
VAMP2P63027 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAMP2P63027 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAMP2P63027 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms