Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RAB1AP62820 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.83■□□□□ 0.45
RAB1AP62820 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB1AP62820 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB1AP62820 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB1AP62820 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB1AP62820 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB1AP62820 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.83■□□□□ 0.44
RAB1AP62820 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB1AP62820 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB1AP62820 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB1AP62820 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RAB1AP62820 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB1AP62820 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB1AP62820 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB1AP62820 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RAB1AP62820 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB1AP62820 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RAB1AP62820 SLC29A4P1-201ENST00000398760 971 ntBASIC17.82■□□□□ 0.44
RAB1AP62820 AL355472.2-201ENST00000422958 438 ntBASIC17.82■□□□□ 0.44
RAB1AP62820 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.82■□□□□ 0.44
RAB1AP62820 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RAB1AP62820 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB1AP62820 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.82■□□□□ 0.44
RAB1AP62820 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.82■□□□□ 0.44
RAB1AP62820 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB1AP62820 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB1AP62820 AC087633.2-202ENST00000565166 1439 ntBASIC17.81■□□□□ 0.44
RAB1AP62820 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RAB1AP62820 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB1AP62820 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB1AP62820 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RAB1AP62820 KRT18P68-201ENST00000392293 1000 ntBASIC17.81■□□□□ 0.44
RAB1AP62820 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB1AP62820 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAB1AP62820 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB1AP62820 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RAB1AP62820 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.81■□□□□ 0.44
RAB1AP62820 CYP2T3P-201ENST00000601990 817 ntBASIC17.81■□□□□ 0.44
RAB1AP62820 AL109923.1-201ENST00000618799 583 ntBASIC17.81■□□□□ 0.44
RAB1AP62820 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAB1AP62820 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB1AP62820 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
RAB1AP62820 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB1AP62820 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RAB1AP62820 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB1AP62820 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB1AP62820 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB1AP62820 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RAB1AP62820 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
RAB1AP62820 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB1AP62820 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
RAB1AP62820 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB1AP62820 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB1AP62820 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB1AP62820 TSPY6P-201ENST00000448518 926 ntBASIC17.8■□□□□ 0.44
RAB1AP62820 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB1AP62820 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB1AP62820 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB1AP62820 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB1AP62820 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.8■□□□□ 0.44
RAB1AP62820 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB1AP62820 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB1AP62820 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB1AP62820 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAB1AP62820 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RAB1AP62820 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB1AP62820 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
RAB1AP62820 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB1AP62820 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAB1AP62820 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms