Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.7■□□□□ 0.42
SEC61A1P61619 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.7■□□□□ 0.42
SEC61A1P61619 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 AC080038.1-201ENST00000611274 1154 ntBASIC17.7■□□□□ 0.42
SEC61A1P61619 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.7■□□□□ 0.42
SEC61A1P61619 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEC61A1P61619 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.7■□□□□ 0.42
SEC61A1P61619 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SEC61A1P61619 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SEC61A1P61619 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
SEC61A1P61619 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.69■□□□□ 0.42
SEC61A1P61619 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
SEC61A1P61619 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 AC138932.1-201ENST00000534164 6830 ntBASIC17.69■□□□□ 0.42
SEC61A1P61619 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.69■□□□□ 0.42
SEC61A1P61619 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEC61A1P61619 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SEC61A1P61619 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.68■□□□□ 0.42
SEC61A1P61619 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SEC61A1P61619 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEC61A1P61619 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.68■□□□□ 0.42
SEC61A1P61619 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SEC61A1P61619 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SEC61A1P61619 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.68■□□□□ 0.42
SEC61A1P61619 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SEC61A1P61619 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEC61A1P61619 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEC61A1P61619 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SEC61A1P61619 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
SEC61A1P61619 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEC61A1P61619 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.68■□□□□ 0.42
SEC61A1P61619 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SEC61A1P61619 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEC61A1P61619 BID-214ENST00000617586 542 ntTSL 5 BASIC17.68■□□□□ 0.42
SEC61A1P61619 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SEC61A1P61619 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.68■□□□□ 0.42
SEC61A1P61619 AC018445.3-201ENST00000624177 1945 ntBASIC17.68■□□□□ 0.42
SEC61A1P61619 AC003102.1-202ENST00000563394 1796 ntBASIC17.68■□□□□ 0.42
SEC61A1P61619 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEC61A1P61619 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SEC61A1P61619 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEC61A1P61619 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.68■□□□□ 0.42
SEC61A1P61619 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.67■□□□□ 0.42
SEC61A1P61619 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.67■□□□□ 0.42
SEC61A1P61619 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.67■□□□□ 0.42
SEC61A1P61619 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.67■□□□□ 0.42
SEC61A1P61619 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.67■□□□□ 0.42
SEC61A1P61619 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.67■□□□□ 0.42
SEC61A1P61619 AP001160.3-201ENST00000601484 763 ntBASIC17.67■□□□□ 0.42
SEC61A1P61619 UBE2DNL-204ENST00000602536 740 ntBASIC17.67■□□□□ 0.42
SEC61A1P61619 AC011767.1-201ENST00000617410 1153 ntBASIC17.67■□□□□ 0.42
SEC61A1P61619 AC073111.5-205ENST00000641717 521 ntBASIC17.67■□□□□ 0.42
SEC61A1P61619 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SEC61A1P61619 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SEC61A1P61619 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.67■□□□□ 0.42
SEC61A1P61619 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.67■□□□□ 0.42
SEC61A1P61619 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SEC61A1P61619 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEC61A1P61619 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.66■□□□□ 0.42
SEC61A1P61619 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEC61A1P61619 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.66■□□□□ 0.42
SEC61A1P61619 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEC61A1P61619 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEC61A1P61619 SMG8-203ENST00000578922 2178 ntBASIC17.66■□□□□ 0.42
SEC61A1P61619 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.66■□□□□ 0.42
SEC61A1P61619 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEC61A1P61619 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SEC61A1P61619 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SEC61A1P61619 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SEC61A1P61619 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEC61A1P61619 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms