Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.53■□□□□ 0.56
CDC42P60953 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDC42P60953 EEF1DP3-203ENST00000566025 782 ntBASIC18.53■□□□□ 0.56
CDC42P60953 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC42P60953 AC061975.6-201ENST00000579045 1553 ntBASIC18.53■□□□□ 0.56
CDC42P60953 MIR4466-201ENST00000606121 54 ntBASIC18.53■□□□□ 0.56
CDC42P60953 AC233992.3-201ENST00000607491 485 ntBASIC18.53■□□□□ 0.56
CDC42P60953 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.53■□□□□ 0.56
CDC42P60953 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.53■□□□□ 0.56
CDC42P60953 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC42P60953 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.53■□□□□ 0.56
CDC42P60953 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC42P60953 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC42P60953 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDC42P60953 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CDC42P60953 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.52■□□□□ 0.56
CDC42P60953 HCG11-201ENST00000411553 5696 ntBASIC18.52■□□□□ 0.56
CDC42P60953 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 AL158211.5-201ENST00000623583 2518 ntBASIC18.52■□□□□ 0.56
CDC42P60953 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.52■□□□□ 0.56
CDC42P60953 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDC42P60953 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CDC42P60953 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDC42P60953 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CDC42P60953 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.52■□□□□ 0.56
CDC42P60953 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.52■□□□□ 0.56
CDC42P60953 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDC42P60953 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDC42P60953 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDC42P60953 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC42P60953 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDC42P60953 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.52■□□□□ 0.55
CDC42P60953 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.52■□□□□ 0.55
CDC42P60953 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDC42P60953 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.51■□□□□ 0.55
CDC42P60953 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.51■□□□□ 0.55
CDC42P60953 AC098818.2-201ENST00000564925 2320 ntBASIC18.51■□□□□ 0.55
CDC42P60953 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.51■□□□□ 0.55
CDC42P60953 AC125437.2-201ENST00000625180 2167 ntBASIC18.51■□□□□ 0.55
CDC42P60953 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.51■□□□□ 0.55
CDC42P60953 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDC42P60953 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.51■□□□□ 0.55
CDC42P60953 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.51■□□□□ 0.55
CDC42P60953 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 AC105233.4-201ENST00000642045 216 ntBASIC18.51■□□□□ 0.55
CDC42P60953 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.51■□□□□ 0.55
CDC42P60953 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDC42P60953 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.51■□□□□ 0.55
CDC42P60953 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDC42P60953 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC42P60953 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.5■□□□□ 0.55
CDC42P60953 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.5■□□□□ 0.55
CDC42P60953 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDC42P60953 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC42P60953 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
CDC42P60953 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDC42P60953 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDC42P60953 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.5■□□□□ 0.55
CDC42P60953 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.5■□□□□ 0.55
CDC42P60953 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDC42P60953 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDC42P60953 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
CDC42P60953 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.5■□□□□ 0.55
CDC42P60953 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC42P60953 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC42P60953 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDC42P60953 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC42P60953 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDC42P60953 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDC42P60953 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms