Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.44■□□□□ 0.7
VSX2P58304 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VSX2P58304 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.44■□□□□ 0.7
VSX2P58304 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VSX2P58304 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.43■□□□□ 0.7
VSX2P58304 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VSX2P58304 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.43■□□□□ 0.7
VSX2P58304 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.43■□□□□ 0.7
VSX2P58304 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.43■□□□□ 0.7
VSX2P58304 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.43■□□□□ 0.7
VSX2P58304 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
VSX2P58304 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.43■□□□□ 0.7
VSX2P58304 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.43■□□□□ 0.7
VSX2P58304 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.43■□□□□ 0.7
VSX2P58304 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VSX2P58304 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSX2P58304 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.42■□□□□ 0.7
VSX2P58304 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSX2P58304 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.42■□□□□ 0.7
VSX2P58304 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSX2P58304 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VSX2P58304 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSX2P58304 FP700111.2-201ENST00000619190 1892 ntBASIC19.42■□□□□ 0.7
VSX2P58304 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.42■□□□□ 0.7
VSX2P58304 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.42■□□□□ 0.7
VSX2P58304 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.42■□□□□ 0.7
VSX2P58304 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.42■□□□□ 0.7
VSX2P58304 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.42■□□□□ 0.7
VSX2P58304 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VSX2P58304 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.42■□□□□ 0.7
VSX2P58304 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.42■□□□□ 0.7
VSX2P58304 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSX2P58304 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSX2P58304 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.42■□□□□ 0.7
VSX2P58304 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VSX2P58304 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.42■□□□□ 0.7
VSX2P58304 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.42■□□□□ 0.7
VSX2P58304 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
VSX2P58304 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
VSX2P58304 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.41■□□□□ 0.7
VSX2P58304 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.41■□□□□ 0.7
VSX2P58304 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VSX2P58304 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.41■□□□□ 0.7
VSX2P58304 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.41■□□□□ 0.7
VSX2P58304 C2orf69P4-201ENST00000565394 541 ntBASIC19.41■□□□□ 0.7
VSX2P58304 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VSX2P58304 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VSX2P58304 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.41■□□□□ 0.7
VSX2P58304 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.41■□□□□ 0.7
VSX2P58304 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.41■□□□□ 0.7
VSX2P58304 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
VSX2P58304 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.41■□□□□ 0.7
VSX2P58304 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VSX2P58304 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.41■□□□□ 0.7
VSX2P58304 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VSX2P58304 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.4■□□□□ 0.7
VSX2P58304 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
VSX2P58304 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VSX2P58304 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VSX2P58304 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
VSX2P58304 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.4■□□□□ 0.7
VSX2P58304 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.4■□□□□ 0.7
VSX2P58304 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VSX2P58304 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VSX2P58304 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VSX2P58304 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VSX2P58304 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.4■□□□□ 0.7
VSX2P58304 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.4■□□□□ 0.7
VSX2P58304 KRT8P36-201ENST00000489121 1440 ntBASIC19.4■□□□□ 0.7
VSX2P58304 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VSX2P58304 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VSX2P58304 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VSX2P58304 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
VSX2P58304 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
VSX2P58304 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
VSX2P58304 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VSX2P58304 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
VSX2P58304 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.39■□□□□ 0.7
VSX2P58304 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
VSX2P58304 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSX2P58304 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VSX2P58304 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSX2P58304 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms