Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.9□□□□□ -0.02
APOC4P55056 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.9□□□□□ -0.02
APOC4P55056 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.9□□□□□ -0.02
APOC4P55056 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 AC006058.3-201ENST00000606217 1069 ntBASIC14.9□□□□□ -0.02
APOC4P55056 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
APOC4P55056 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC4P55056 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC4P55056 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC4P55056 AL024507.2-201ENST00000606070 2574 ntBASIC14.89□□□□□ -0.03
APOC4P55056 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC4P55056 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC4P55056 STK25-234ENST00000535007 2459 ntTSL 2 BASIC14.89□□□□□ -0.03
APOC4P55056 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14.89□□□□□ -0.03
APOC4P55056 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.89□□□□□ -0.03
APOC4P55056 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
APOC4P55056 AC027702.1-201ENST00000563810 1770 ntBASIC14.89□□□□□ -0.03
APOC4P55056 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC4P55056 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.89□□□□□ -0.03
APOC4P55056 KRT17P3-201ENST00000420566 1262 ntBASIC14.89□□□□□ -0.03
APOC4P55056 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.89□□□□□ -0.03
APOC4P55056 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC4P55056 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.89□□□□□ -0.03
APOC4P55056 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
APOC4P55056 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
APOC4P55056 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.89□□□□□ -0.03
APOC4P55056 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.89□□□□□ -0.03
APOC4P55056 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.89□□□□□ -0.03
APOC4P55056 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.89□□□□□ -0.03
APOC4P55056 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC4P55056 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC4P55056 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC4P55056 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
APOC4P55056 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
APOC4P55056 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC4P55056 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APOC4P55056 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APOC4P55056 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.88□□□□□ -0.03
APOC4P55056 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.88□□□□□ -0.03
APOC4P55056 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.88□□□□□ -0.03
APOC4P55056 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.88□□□□□ -0.03
APOC4P55056 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC4P55056 AC079834.2-201ENST00000609776 1949 ntBASIC14.88□□□□□ -0.03
APOC4P55056 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APOC4P55056 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC4P55056 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC4P55056 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC4P55056 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
APOC4P55056 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC4P55056 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
APOC4P55056 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 UNC93B4-201ENST00000505679 747 ntBASIC14.87□□□□□ -0.03
APOC4P55056 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 SOX15-203ENST00000570788 1093 ntBASIC14.87□□□□□ -0.03
APOC4P55056 MIR2861-201ENST00000636310 90 ntBASIC14.87□□□□□ -0.03
APOC4P55056 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC4P55056 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC4P55056 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC4P55056 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms