Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 KRT8P36-201ENST00000489121 1440 ntBASIC19.6■□□□□ 0.73
EPHA4P54764 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 AC121338.2-201ENST00000622535 1744 ntBASIC19.6■□□□□ 0.73
EPHA4P54764 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
EPHA4P54764 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
EPHA4P54764 AL390719.1-204ENST00000412397 1219 ntBASIC19.6■□□□□ 0.73
EPHA4P54764 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHA4P54764 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.6■□□□□ 0.73
EPHA4P54764 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
EPHA4P54764 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
EPHA4P54764 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
EPHA4P54764 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHA4P54764 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
EPHA4P54764 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA4P54764 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHA4P54764 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHA4P54764 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA4P54764 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA4P54764 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA4P54764 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA4P54764 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EPHA4P54764 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA4P54764 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA4P54764 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHA4P54764 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
EPHA4P54764 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.59■□□□□ 0.73
EPHA4P54764 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.59■□□□□ 0.73
EPHA4P54764 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.59■□□□□ 0.73
EPHA4P54764 RN7SL471P-201ENST00000580476 299 ntBASIC19.59■□□□□ 0.73
EPHA4P54764 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
EPHA4P54764 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHA4P54764 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHA4P54764 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EPHA4P54764 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA4P54764 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHA4P54764 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHA4P54764 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
EPHA4P54764 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHA4P54764 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
EPHA4P54764 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHA4P54764 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
EPHA4P54764 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.58■□□□□ 0.73
EPHA4P54764 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EPHA4P54764 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
EPHA4P54764 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.58■□□□□ 0.72
EPHA4P54764 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.58■□□□□ 0.72
EPHA4P54764 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.58■□□□□ 0.72
EPHA4P54764 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.58■□□□□ 0.72
EPHA4P54764 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
EPHA4P54764 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.58■□□□□ 0.72
EPHA4P54764 AL359736.2-201ENST00000621992 437 ntBASIC19.58■□□□□ 0.72
EPHA4P54764 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EPHA4P54764 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.58■□□□□ 0.72
EPHA4P54764 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EPHA4P54764 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.58■□□□□ 0.72
EPHA4P54764 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHA4P54764 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.58■□□□□ 0.72
EPHA4P54764 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPHA4P54764 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.58■□□□□ 0.72
EPHA4P54764 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.58■□□□□ 0.72
EPHA4P54764 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA4P54764 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.57■□□□□ 0.72
EPHA4P54764 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA4P54764 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.57■□□□□ 0.72
EPHA4P54764 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA4P54764 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA4P54764 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA4P54764 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.57■□□□□ 0.72
EPHA4P54764 UBE2SP1-201ENST00000450587 669 ntBASIC19.57■□□□□ 0.72
EPHA4P54764 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
EPHA4P54764 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.57■□□□□ 0.72
EPHA4P54764 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EPHA4P54764 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA4P54764 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA4P54764 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
EPHA4P54764 SLC25A24-204ENST00000569674 2357 ntBASIC19.57■□□□□ 0.72
EPHA4P54764 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPHA4P54764 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
EPHA4P54764 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA4P54764 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA4P54764 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
EPHA4P54764 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA4P54764 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA4P54764 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA4P54764 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA4P54764 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
EPHA4P54764 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA4P54764 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
EPHA4P54764 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.56■□□□□ 0.72
EPHA4P54764 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPHA4P54764 AC120498.8-201ENST00000614275 531 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms