Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 BUD2YKL092C 3315 nt1.66□□□□□ -2.14
YNL040WP53960 ATG9YDL149W 2994 nt1.65□□□□□ -2.14
YNL040WP53960 SPC1YJR010C-A 285 nt1.65□□□□□ -2.15
YNL040WP53960 EAF6YJR082C 342 nt1.65□□□□□ -2.15
YNL040WP53960 YJR140W-AYJR140W-A 150 nt1.65□□□□□ -2.15
YNL040WP53960 IRC16YPR038W 360 nt1.65□□□□□ -2.15
YNL040WP53960 NUP82YJL061W 2142 nt1.64□□□□□ -2.15
YNL040WP53960 SMB1YER029C 591 nt1.64□□□□□ -2.15
YNL040WP53960 GRX8YLR364W 330 nt1.64□□□□□ -2.15
YNL040WP53960 YNL144CYNL144C 2223 nt1.64□□□□□ -2.15
YNL040WP53960 RIC1YLR039C 3171 nt1.64□□□□□ -2.15
YNL040WP53960 RPH1YER169W 2391 nt1.63□□□□□ -2.15
YNL040WP53960 BPH1YCR032W 6504 nt1.63□□□□□ -2.15
YNL040WP53960 YDL068WYDL068W 330 nt1.63□□□□□ -2.15
YNL040WP53960 YDR286CYDR286C 345 nt1.63□□□□□ -2.15
YNL040WP53960 HOP2YGL033W 657 nt1.63□□□□□ -2.15
YNL040WP53960 SMD1YGR074W 441 nt1.63□□□□□ -2.15
YNL040WP53960 YGR290WYGR290W 444 nt1.63□□□□□ -2.15
YNL040WP53960 YHL037CYHL037C 402 nt1.63□□□□□ -2.15
YNL040WP53960 RPA34YJL148W 702 nt1.63□□□□□ -2.15
YNL040WP53960 SBE22YHR103W 2559 nt1.63□□□□□ -2.15
YNL040WP53960 DNF3YMR162C 4971 nt1.63□□□□□ -2.15
YNL040WP53960 SLM1YIL105C 2061 nt1.62□□□□□ -2.15
YNL040WP53960 YCR087C-AYCR087C-A 462 nt1.62□□□□□ -2.15
YNL040WP53960 YDL062WYDL062W 426 nt1.62□□□□□ -2.15
YNL040WP53960 YEL018C-AYEL018C-A 534 nt1.62□□□□□ -2.15
YNL040WP53960 RPL9AYGL147C 576 nt1.62□□□□□ -2.15
YNL040WP53960 YHR073W-AYHR073W-A 177 nt1.62□□□□□ -2.15
YNL040WP53960 RPC10YHR143W-A 213 nt1.62□□□□□ -2.15
YNL040WP53960 NCE101YJL205C 162 nt1.62□□□□□ -2.15
YNL040WP53960 YKL068W-AYKL068W-A 237 nt1.62□□□□□ -2.15
YNL040WP53960 YKL111CYKL111C 336 nt1.62□□□□□ -2.15
YNL040WP53960 PKR1YMR123W 369 nt1.62□□□□□ -2.15
YNL040WP53960 GPI15YNL038W 690 nt1.62□□□□□ -2.15
YNL040WP53960 YOR343W-BYOR343W-B 5313 nt1.61□□□□□ -2.15
YNL040WP53960 VMR1YHL035C 4779 nt1.61□□□□□ -2.15
YNL040WP53960 YBP1YBR216C 2025 nt1.61□□□□□ -2.15
YNL040WP53960 YHR214C-CYHR214C-C 1437 nt1.61□□□□□ -2.15
YNL040WP53960 YAP3YHL009C 993 nt1.61□□□□□ -2.15
YNL040WP53960 YJR079WYJR079W 330 nt1.61□□□□□ -2.15
YNL040WP53960 IRC19YLL033W 693 nt1.61□□□□□ -2.15
YNL040WP53960 YBR174CYBR174C 315 nt1.61□□□□□ -2.15
YNL040WP53960 Q0017Q0017 162 nt1.61□□□□□ -2.15
YNL040WP53960 MEC1YBR136W 7107 nt1.61□□□□□ -2.15
YNL040WP53960 PAU3YCR104W 375 nt1.6□□□□□ -2.15
YNL040WP53960 ATP17YDR377W 306 nt1.6□□□□□ -2.15
YNL040WP53960 VOA1YGR106C 798 nt1.6□□□□□ -2.15
YNL040WP53960 RPI1YIL119C 1224 nt1.6□□□□□ -2.15
YNL040WP53960 CTK3YML112W 891 nt1.6□□□□□ -2.15
YNL040WP53960 YMR052C-AYMR052C-A 366 nt1.6□□□□□ -2.15
YNL040WP53960 DDR48YMR173W 1293 nt1.6□□□□□ -2.15
YNL040WP53960 YMR324CYMR324C 243 nt1.6□□□□□ -2.15
YNL040WP53960 NOP15YNL110C 663 nt1.6□□□□□ -2.15
YNL040WP53960 SNC2YOR327C 348 nt1.6□□□□□ -2.15
YNL040WP53960 ROX1YPR065W 1107 nt1.6□□□□□ -2.15
YNL040WP53960 RKM1YPL208W 1752 nt1.59□□□□□ -2.15
YNL040WP53960 CFT2YLR115W 2580 nt1.59□□□□□ -2.15
YNL040WP53960 SPO22YIL073C 2928 nt1.59□□□□□ -2.15
YNL040WP53960 tQ(UUG)E2tQ(UUG)E2 72 nt1.59□□□□□ -2.15
YNL040WP53960 MRPL44YMR225C 297 nt1.59□□□□□ -2.15
YNL040WP53960 COX7YMR256C 183 nt1.59□□□□□ -2.15
YNL040WP53960 CTF4YPR135W 2784 nt1.59□□□□□ -2.15
YNL040WP53960 BRR2YER172C 6492 nt1.59□□□□□ -2.16
YNL040WP53960 FIG2YCR089W 4830 nt1.58□□□□□ -2.16
YNL040WP53960 MSH6YDR097C 3729 nt1.58□□□□□ -2.16
YNL040WP53960 YGL069CYGL069C 465 nt1.58□□□□□ -2.16
YNL040WP53960 FYV7YLR068W 456 nt1.58□□□□□ -2.16
YNL040WP53960 SYM1YLR251W 594 nt1.58□□□□□ -2.16
YNL040WP53960 SEN15YMR059W 387 nt1.58□□□□□ -2.16
YNL040WP53960 YOL013W-BYOL013W-B 291 nt1.58□□□□□ -2.16
YNL040WP53960 RTC6YPL183W-A 282 nt1.58□□□□□ -2.16
YNL040WP53960 CDC27YBL084C 2277 nt1.57□□□□□ -2.16
YNL040WP53960 YCR102W-AYCR102W-A 198 nt1.57□□□□□ -2.16
YNL040WP53960 MTC7YEL033W 420 nt1.57□□□□□ -2.16
YNL040WP53960 tT(UGU)Q1tT(UGU)Q1 76 nt1.57□□□□□ -2.16
YNL040WP53960 PBI2YNL015W 228 nt1.57□□□□□ -2.16
YNL040WP53960 VPS52YDR484W 1926 nt1.57□□□□□ -2.16
YNL040WP53960 LYS9YNR050C 1341 nt1.57□□□□□ -2.16
YNL040WP53960 HSL1YKL101W 4557 nt1.57□□□□□ -2.16
YNL040WP53960 MNL2YLR057W 2550 nt1.56□□□□□ -2.16
YNL040WP53960 SNF5YBR289W 2718 nt1.56□□□□□ -2.16
YNL040WP53960 CAT8YMR280C 4302 nt1.56□□□□□ -2.16
YNL040WP53960 BTT1YDR252W 450 nt1.56□□□□□ -2.16
YNL040WP53960 YER188C-AYER188C-A 300 nt1.56□□□□□ -2.16
YNL040WP53960 LSO2YGR169C-A 279 nt1.56□□□□□ -2.16
YNL040WP53960 YIL102CYIL102C 306 nt1.56□□□□□ -2.16
YNL040WP53960 RPL16AYIL133C 600 nt1.56□□□□□ -2.16
YNL040WP53960 PFD1YJL179W 330 nt1.56□□□□□ -2.16
YNL040WP53960 SEC22YLR268W 645 nt1.56□□□□□ -2.16
YNL040WP53960 CYB5YNL111C 363 nt1.56□□□□□ -2.16
YNL040WP53960 YNL122CYNL122C 348 nt1.56□□□□□ -2.16
YNL040WP53960 SPC29YPL124W 762 nt1.56□□□□□ -2.16
YNL040WP53960 YPR177CYPR177C 372 nt1.56□□□□□ -2.16
YNL040WP53960 VPS35YJL154C 2835 nt1.56□□□□□ -2.16
YNL040WP53960 SEC63YOR254C 1992 nt1.56□□□□□ -2.16
YNL040WP53960 MUD2YKL074C 1584 nt1.55□□□□□ -2.16
YNL040WP53960 SFB2YNL049C 2631 nt1.55□□□□□ -2.16
YNL040WP53960 YDL041WYDL041W 354 nt1.55□□□□□ -2.16
YNL040WP53960 YGR045CYGR045C 363 nt1.55□□□□□ -2.16
YNL040WP53960 YOR394C-AYOR394C-A 168 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms