Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 tL(CAA)G3tL(CAA)G3 82 nt3.37□□□□□ -1.87
CUZ1P53899 tL(CAA)KtL(CAA)K 82 nt3.37□□□□□ -1.87
CUZ1P53899 tL(CAA)LtL(CAA)L 82 nt3.37□□□□□ -1.87
CUZ1P53899 tL(CAA)MtL(CAA)M 82 nt3.37□□□□□ -1.87
CUZ1P53899 tL(CAA)NtL(CAA)N 82 nt3.37□□□□□ -1.87
CUZ1P53899 YOR072W-BYOR072W-B 162 nt3.37□□□□□ -1.87
CUZ1P53899 MLH2YLR035C 2088 nt3.37□□□□□ -1.87
CUZ1P53899 BCK2YER167W 2556 nt3.37□□□□□ -1.87
CUZ1P53899 HOS3YPL116W 2094 nt3.36□□□□□ -1.87
CUZ1P53899 EMC6YLL014W 327 nt3.36□□□□□ -1.87
CUZ1P53899 COX19YLL018C-A 297 nt3.36□□□□□ -1.87
CUZ1P53899 YNL211CYNL211C 261 nt3.36□□□□□ -1.87
CUZ1P53899 YLR352WYLR352W 2424 nt3.36□□□□□ -1.87
CUZ1P53899 RPO31YOR116C 4383 nt3.36□□□□□ -1.87
CUZ1P53899 HMG1YML075C 3165 nt3.36□□□□□ -1.87
CUZ1P53899 ECM22YLR228C 2445 nt3.35□□□□□ -1.87
CUZ1P53899 PAA1YDR071C 576 nt3.35□□□□□ -1.87
CUZ1P53899 FAT1YBR041W 2010 nt3.35□□□□□ -1.87
CUZ1P53899 ZRG17YNR039C 1818 nt3.35□□□□□ -1.87
CUZ1P53899 ELG1YOR144C 2376 nt3.34□□□□□ -1.87
CUZ1P53899 BCH1YMR237W 2175 nt3.34□□□□□ -1.87
CUZ1P53899 YMR31YFR049W 372 nt3.34□□□□□ -1.87
CUZ1P53899 YIL174WYIL174W 228 nt3.34□□□□□ -1.87
CUZ1P53899 YJL222W-AYJL222W-A 228 nt3.34□□□□□ -1.87
CUZ1P53899 YJR112W-AYJR112W-A 330 nt3.34□□□□□ -1.87
CUZ1P53899 RTC6YPL183W-A 282 nt3.34□□□□□ -1.87
CUZ1P53899 snR45snR45 172 nt3.34□□□□□ -1.87
CUZ1P53899 DIP2YLR129W 2832 nt3.34□□□□□ -1.87
CUZ1P53899 MCM7YBR202W 2538 nt3.34□□□□□ -1.88
CUZ1P53899 VPH1YOR270C 2523 nt3.33□□□□□ -1.88
CUZ1P53899 PUF4YGL014W 2667 nt3.33□□□□□ -1.88
CUZ1P53899 SGD1YLR336C 2700 nt3.33□□□□□ -1.88
CUZ1P53899 RPL25YOL127W 429 nt3.33□□□□□ -1.88
CUZ1P53899 VMA9YCL005W-A 222 nt3.33□□□□□ -1.88
CUZ1P53899 NUP120YKL057C 3114 nt3.33□□□□□ -1.88
CUZ1P53899 GIS4YML006C 2325 nt3.33□□□□□ -1.88
CUZ1P53899 YJL070CYJL070C 2667 nt3.33□□□□□ -1.88
CUZ1P53899 RLI1YDR091C 1827 nt3.33□□□□□ -1.88
CUZ1P53899 tS(GCU)Q1tS(GCU)Q1 86 nt3.32□□□□□ -1.88
CUZ1P53899 CCM1YGR150C 2595 nt3.32□□□□□ -1.88
CUZ1P53899 TCO89YPL180W 2400 nt3.31□□□□□ -1.88
CUZ1P53899 PSO2YMR137C 1986 nt3.31□□□□□ -1.88
CUZ1P53899 EXO84YBR102C 2262 nt3.31□□□□□ -1.88
CUZ1P53899 RDS1YCR106W 2499 nt3.3□□□□□ -1.88
CUZ1P53899 OST4YDL232W 111 nt3.3□□□□□ -1.88
CUZ1P53899 YGR050CYGR050C 357 nt3.3□□□□□ -1.88
CUZ1P53899 YGR051CYGR051C 324 nt3.3□□□□□ -1.88
CUZ1P53899 NCA2YPR155C 1851 nt3.3□□□□□ -1.88
CUZ1P53899 MCD4YKL165C 2760 nt3.29□□□□□ -1.88
CUZ1P53899 SWH1YAR042W 3567 nt3.29□□□□□ -1.88
CUZ1P53899 PRP22YER013W 3438 nt3.29□□□□□ -1.88
CUZ1P53899 YEL032C-AYEL032C-A 162 nt3.29□□□□□ -1.88
CUZ1P53899 OSH2YDL019C 3852 nt3.29□□□□□ -1.88
CUZ1P53899 VPS53YJL029C 2469 nt3.29□□□□□ -1.88
CUZ1P53899 APL4YPR029C 2499 nt3.29□□□□□ -1.88
CUZ1P53899 XRN1YGL173C 4587 nt3.29□□□□□ -1.88
CUZ1P53899 HAL9YOL089C 3093 nt3.28□□□□□ -1.88
CUZ1P53899 CHS3YBR023C 3498 nt3.28□□□□□ -1.88
CUZ1P53899 ATP7YKL016C 525 nt3.28□□□□□ -1.88
CUZ1P53899 RPL22AYLR061W 366 nt3.28□□□□□ -1.88
CUZ1P53899 GRX8YLR364W 330 nt3.28□□□□□ -1.88
CUZ1P53899 NAB3YPL190C 2409 nt3.28□□□□□ -1.89
CUZ1P53899 SOK1YDR006C 2706 nt3.28□□□□□ -1.89
CUZ1P53899 TOP1YOL006C 2310 nt3.27□□□□□ -1.89
CUZ1P53899 SEC15YGL233W 2733 nt3.27□□□□□ -1.89
CUZ1P53899 HYP2YEL034W 474 nt3.27□□□□□ -1.89
CUZ1P53899 YFR012W-AYFR012W-A 87 nt3.27□□□□□ -1.89
CUZ1P53899 YBR174CYBR174C 315 nt3.27□□□□□ -1.89
CUZ1P53899 TMA19YKL056C 504 nt3.26□□□□□ -1.89
CUZ1P53899 VPS34YLR240W 2628 nt3.26□□□□□ -1.89
CUZ1P53899 ATG26YLR189C 3597 nt3.26□□□□□ -1.89
CUZ1P53899 RSN1YMR266W 2862 nt3.26□□□□□ -1.89
CUZ1P53899 NTO1YPR031W 2247 nt3.25□□□□□ -1.89
CUZ1P53899 MET10YFR030W 3108 nt3.25□□□□□ -1.89
CUZ1P53899 FAR1YJL157C 2493 nt3.25□□□□□ -1.89
CUZ1P53899 YDL196WYDL196W 330 nt3.25□□□□□ -1.89
CUZ1P53899 CMC4YMR194C-B 222 nt3.25□□□□□ -1.89
CUZ1P53899 PSK2YOL045W 3306 nt3.25□□□□□ -1.89
CUZ1P53899 RRM3YHR031C 2172 nt3.25□□□□□ -1.89
CUZ1P53899 TMA108YIL137C 2841 nt3.25□□□□□ -1.89
CUZ1P53899 AHC1YOR023C 1701 nt3.24□□□□□ -1.89
CUZ1P53899 FLO10YKR102W 3510 nt3.24□□□□□ -1.89
CUZ1P53899 CHD1YER164W 4407 nt3.24□□□□□ -1.89
CUZ1P53899 JEN1YKL217W 1851 nt3.24□□□□□ -1.89
CUZ1P53899 YDR034C-DYDR034C-D 5313 nt3.24□□□□□ -1.89
CUZ1P53899 TIM11YDR322C-A 291 nt3.24□□□□□ -1.89
CUZ1P53899 YGL014C-AYGL014C-A 162 nt3.24□□□□□ -1.89
CUZ1P53899 YBR206WYBR206W 324 nt3.24□□□□□ -1.89
CUZ1P53899 PHO81YGR233C 3537 nt3.24□□□□□ -1.89
CUZ1P53899 MPH1YIR002C 2982 nt3.24□□□□□ -1.89
CUZ1P53899 YGR027W-BYGR027W-B 5268 nt3.23□□□□□ -1.89
CUZ1P53899 YLR227W-BYLR227W-B 5268 nt3.23□□□□□ -1.89
CUZ1P53899 YPR158C-DYPR158C-D 5268 nt3.23□□□□□ -1.89
CUZ1P53899 YDR239CYDR239C 2364 nt3.23□□□□□ -1.89
CUZ1P53899 LRG1YDL240W 3054 nt3.23□□□□□ -1.89
CUZ1P53899 YLR149CYLR149C 2193 nt3.23□□□□□ -1.89
CUZ1P53899 RPL33AYPL143W 324 nt3.23□□□□□ -1.89
CUZ1P53899 SPT6YGR116W 4356 nt3.23□□□□□ -1.89
CUZ1P53899 VBA4YDR119W 2307 nt3.22□□□□□ -1.89
CUZ1P53899 APE2YKL157W 2859 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 37.7 ms