Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
RXRGP48443 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.29■□□□□ 0.84
RXRGP48443 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RXRGP48443 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.29■□□□□ 0.84
RXRGP48443 AC026310.3-201ENST00000625186 2373 ntBASIC20.29■□□□□ 0.84
RXRGP48443 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRGP48443 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RXRGP48443 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RXRGP48443 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 FAM99A-202ENST00000538190 1989 ntBASIC20.28■□□□□ 0.84
RXRGP48443 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.28■□□□□ 0.84
RXRGP48443 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.28■□□□□ 0.84
RXRGP48443 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RXRGP48443 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.28■□□□□ 0.84
RXRGP48443 AL359736.2-201ENST00000621992 437 ntBASIC20.28■□□□□ 0.84
RXRGP48443 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.28■□□□□ 0.84
RXRGP48443 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RXRGP48443 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RXRGP48443 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RXRGP48443 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RXRGP48443 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
RXRGP48443 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RXRGP48443 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RXRGP48443 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RXRGP48443 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.27■□□□□ 0.84
RXRGP48443 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RXRGP48443 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.27■□□□□ 0.84
RXRGP48443 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RXRGP48443 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.27■□□□□ 0.84
RXRGP48443 AC008550.1-201ENST00000511500 884 ntBASIC20.27■□□□□ 0.84
RXRGP48443 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RXRGP48443 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
RXRGP48443 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RXRGP48443 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RXRGP48443 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RXRGP48443 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.27■□□□□ 0.84
RXRGP48443 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RXRGP48443 AC244015.2-201ENST00000616358 1861 ntBASIC20.26■□□□□ 0.83
RXRGP48443 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RXRGP48443 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RXRGP48443 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 CYP21A1P-202ENST00000354927 1481 ntBASIC20.26■□□□□ 0.83
RXRGP48443 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RXRGP48443 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RXRGP48443 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.26■□□□□ 0.83
RXRGP48443 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RXRGP48443 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.26■□□□□ 0.83
RXRGP48443 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.26■□□□□ 0.83
RXRGP48443 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.26■□□□□ 0.83
RXRGP48443 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.26■□□□□ 0.83
RXRGP48443 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RXRGP48443 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.25■□□□□ 0.83
RXRGP48443 AC092368.3-202ENST00000574180 1591 ntBASIC20.25■□□□□ 0.83
RXRGP48443 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.25■□□□□ 0.83
RXRGP48443 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RXRGP48443 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.25■□□□□ 0.83
RXRGP48443 AF106564.1-201ENST00000607058 2553 ntBASIC20.25■□□□□ 0.83
RXRGP48443 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.25■□□□□ 0.83
RXRGP48443 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 KRT17P3-201ENST00000420566 1262 ntBASIC20.25■□□□□ 0.83
RXRGP48443 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.25■□□□□ 0.83
RXRGP48443 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.25■□□□□ 0.83
RXRGP48443 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.25■□□□□ 0.83
RXRGP48443 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.25■□□□□ 0.83
RXRGP48443 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.25■□□□□ 0.83
RXRGP48443 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.25■□□□□ 0.83
RXRGP48443 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.25■□□□□ 0.83
RXRGP48443 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RXRGP48443 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms