Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
GABRA4P48169 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA4P48169 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
GABRA4P48169 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA4P48169 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA4P48169 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA4P48169 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA4P48169 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA4P48169 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.32■□□□□ 0.68
GABRA4P48169 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.31■□□□□ 0.68
GABRA4P48169 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA4P48169 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA4P48169 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA4P48169 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA4P48169 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.31■□□□□ 0.68
GABRA4P48169 AC128676.1-201ENST00000454392 318 ntBASIC19.31■□□□□ 0.68
GABRA4P48169 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.31■□□□□ 0.68
GABRA4P48169 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA4P48169 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA4P48169 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.31■□□□□ 0.68
GABRA4P48169 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA4P48169 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA4P48169 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GABRA4P48169 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.31■□□□□ 0.68
GABRA4P48169 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA4P48169 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA4P48169 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA4P48169 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA4P48169 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.3■□□□□ 0.68
GABRA4P48169 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA4P48169 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA4P48169 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA4P48169 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA4P48169 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
GABRA4P48169 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.3■□□□□ 0.68
GABRA4P48169 AC005829.2-201ENST00000571422 1056 ntBASIC19.3■□□□□ 0.68
GABRA4P48169 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
GABRA4P48169 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
GABRA4P48169 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.29■□□□□ 0.68
GABRA4P48169 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.29■□□□□ 0.68
GABRA4P48169 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
GABRA4P48169 AC007375.3-201ENST00000600936 2314 ntBASIC19.29■□□□□ 0.68
GABRA4P48169 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GABRA4P48169 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
GABRA4P48169 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.29■□□□□ 0.68
GABRA4P48169 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.29■□□□□ 0.68
GABRA4P48169 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
GABRA4P48169 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.29■□□□□ 0.68
GABRA4P48169 AC098590.1-201ENST00000468126 897 ntBASIC19.29■□□□□ 0.68
GABRA4P48169 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GABRA4P48169 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 AC073648.6-201ENST00000641589 218 ntBASIC19.29■□□□□ 0.68
GABRA4P48169 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
GABRA4P48169 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
GABRA4P48169 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA4P48169 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRA4P48169 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.28■□□□□ 0.68
GABRA4P48169 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
GABRA4P48169 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.28■□□□□ 0.68
GABRA4P48169 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRA4P48169 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.28■□□□□ 0.68
GABRA4P48169 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
GABRA4P48169 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GABRA4P48169 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GABRA4P48169 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
GABRA4P48169 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GABRA4P48169 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.28■□□□□ 0.68
GABRA4P48169 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRA4P48169 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRA4P48169 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA4P48169 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA4P48169 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.27■□□□□ 0.68
GABRA4P48169 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.27■□□□□ 0.68
GABRA4P48169 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA4P48169 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA4P48169 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA4P48169 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.27■□□□□ 0.68
GABRA4P48169 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms