Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.7■■□□□ 1.06
BRCC3P46736 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRCC3P46736 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRCC3P46736 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
BRCC3P46736 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRCC3P46736 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.7■■□□□ 1.06
BRCC3P46736 AC005829.2-201ENST00000571422 1056 ntBASIC21.7■■□□□ 1.06
BRCC3P46736 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
BRCC3P46736 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRCC3P46736 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.7■■□□□ 1.06
BRCC3P46736 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRCC3P46736 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRCC3P46736 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
BRCC3P46736 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRCC3P46736 AC026310.3-201ENST00000625186 2373 ntBASIC21.69■■□□□ 1.06
BRCC3P46736 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRCC3P46736 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
BRCC3P46736 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.69■■□□□ 1.06
BRCC3P46736 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.69■■□□□ 1.06
BRCC3P46736 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRCC3P46736 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.69■■□□□ 1.06
BRCC3P46736 RPPH1-201ENST00000516869 333 ntBASIC21.69■■□□□ 1.06
BRCC3P46736 RN7SL471P-201ENST00000580476 299 ntBASIC21.69■■□□□ 1.06
BRCC3P46736 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.69■■□□□ 1.06
BRCC3P46736 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRCC3P46736 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.69■■□□□ 1.06
BRCC3P46736 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRCC3P46736 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.69■■□□□ 1.06
BRCC3P46736 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
BRCC3P46736 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRCC3P46736 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRCC3P46736 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
BRCC3P46736 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCC3P46736 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.68■■□□□ 1.06
BRCC3P46736 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCC3P46736 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCC3P46736 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCC3P46736 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCC3P46736 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
BRCC3P46736 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
BRCC3P46736 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRCC3P46736 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.68■■□□□ 1.06
BRCC3P46736 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.68■■□□□ 1.06
BRCC3P46736 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCC3P46736 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
BRCC3P46736 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.68■■□□□ 1.06
BRCC3P46736 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
BRCC3P46736 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
BRCC3P46736 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
BRCC3P46736 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCC3P46736 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.68■■□□□ 1.06
BRCC3P46736 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.68■■□□□ 1.06
BRCC3P46736 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
BRCC3P46736 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCC3P46736 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCC3P46736 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.67■■□□□ 1.06
BRCC3P46736 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.67■■□□□ 1.06
BRCC3P46736 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCC3P46736 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
BRCC3P46736 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCC3P46736 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.67■■□□□ 1.06
BRCC3P46736 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRCC3P46736 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
BRCC3P46736 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
BRCC3P46736 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.67■■□□□ 1.06
BRCC3P46736 AP006294.2-201ENST00000641667 209 ntBASIC21.67■■□□□ 1.06
BRCC3P46736 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.67■■□□□ 1.06
BRCC3P46736 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
BRCC3P46736 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
BRCC3P46736 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRCC3P46736 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
BRCC3P46736 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRCC3P46736 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRCC3P46736 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRCC3P46736 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
BRCC3P46736 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRCC3P46736 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRCC3P46736 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.66■■□□□ 1.06
BRCC3P46736 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.66■■□□□ 1.06
BRCC3P46736 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.66■■□□□ 1.06
BRCC3P46736 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRCC3P46736 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.66■■□□□ 1.06
BRCC3P46736 AC120498.8-201ENST00000614275 531 ntBASIC21.66■■□□□ 1.06
BRCC3P46736 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRCC3P46736 AC079834.2-201ENST00000609776 1949 ntBASIC21.66■■□□□ 1.06
BRCC3P46736 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRCC3P46736 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.65■■□□□ 1.06
BRCC3P46736 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCC3P46736 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCC3P46736 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.65■■□□□ 1.06
BRCC3P46736 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCC3P46736 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRCC3P46736 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
BRCC3P46736 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCC3P46736 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
BRCC3P46736 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.65■■□□□ 1.06
BRCC3P46736 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRCC3P46736 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.65■■□□□ 1.06
BRCC3P46736 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.65■■□□□ 1.06
BRCC3P46736 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms