Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL15A1P39059 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
COL15A1P39059 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL15A1P39059 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL15A1P39059 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.95■■□□□ 1.74
COL15A1P39059 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL15A1P39059 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.95■■□□□ 1.74
COL15A1P39059 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL15A1P39059 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL15A1P39059 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
COL15A1P39059 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL15A1P39059 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.95■■□□□ 1.74
COL15A1P39059 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
COL15A1P39059 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
COL15A1P39059 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
COL15A1P39059 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL15A1P39059 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
COL15A1P39059 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.95■■□□□ 1.74
COL15A1P39059 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.95■■□□□ 1.74
COL15A1P39059 AC087499.1-201ENST00000418141 1075 ntBASIC25.95■■□□□ 1.74
COL15A1P39059 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.95■■□□□ 1.74
COL15A1P39059 KRT18P21-201ENST00000515767 1272 ntBASIC25.95■■□□□ 1.74
COL15A1P39059 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL15A1P39059 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL15A1P39059 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL15A1P39059 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL15A1P39059 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL15A1P39059 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL15A1P39059 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL15A1P39059 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.94■■□□□ 1.74
COL15A1P39059 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL15A1P39059 AL355075.4-201ENST00000554988 638 ntBASIC25.94■■□□□ 1.74
COL15A1P39059 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL15A1P39059 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL15A1P39059 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL15A1P39059 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL15A1P39059 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.93■■□□□ 1.74
COL15A1P39059 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL15A1P39059 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL15A1P39059 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL15A1P39059 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL15A1P39059 AL390719.1-204ENST00000412397 1219 ntBASIC25.93■■□□□ 1.74
COL15A1P39059 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL15A1P39059 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.93■■□□□ 1.74
COL15A1P39059 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.93■■□□□ 1.74
COL15A1P39059 PRKY-204ENST00000533551 1019 ntBASIC25.93■■□□□ 1.74
COL15A1P39059 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
COL15A1P39059 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
COL15A1P39059 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.93■■□□□ 1.74
COL15A1P39059 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.92■■□□□ 1.74
COL15A1P39059 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL15A1P39059 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.92■■□□□ 1.74
COL15A1P39059 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.92■■□□□ 1.74
COL15A1P39059 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.92■■□□□ 1.74
COL15A1P39059 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.92■■□□□ 1.74
COL15A1P39059 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL15A1P39059 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
COL15A1P39059 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL15A1P39059 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
COL15A1P39059 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL15A1P39059 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.92■■□□□ 1.74
COL15A1P39059 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.92■■□□□ 1.74
COL15A1P39059 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.92■■□□□ 1.74
COL15A1P39059 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.92■■□□□ 1.74
COL15A1P39059 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.92■■□□□ 1.74
COL15A1P39059 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.92■■□□□ 1.74
COL15A1P39059 Z98882.1-201ENST00000622160 2253 ntBASIC25.92■■□□□ 1.74
COL15A1P39059 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.92■■□□□ 1.74
COL15A1P39059 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL15A1P39059 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL15A1P39059 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL15A1P39059 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
COL15A1P39059 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL15A1P39059 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL15A1P39059 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.91■■□□□ 1.74
COL15A1P39059 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.91■■□□□ 1.74
COL15A1P39059 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.91■■□□□ 1.74
COL15A1P39059 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
COL15A1P39059 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
COL15A1P39059 AC133561.5-201ENST00000635547 218 ntBASIC25.91■■□□□ 1.74
COL15A1P39059 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL15A1P39059 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL15A1P39059 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.91■■□□□ 1.74
COL15A1P39059 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.9■■□□□ 1.74
COL15A1P39059 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
COL15A1P39059 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.9■■□□□ 1.74
COL15A1P39059 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.9■■□□□ 1.74
COL15A1P39059 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.9■■□□□ 1.74
COL15A1P39059 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.9■■□□□ 1.74
COL15A1P39059 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.9■■□□□ 1.74
COL15A1P39059 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms