Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHKAP35790 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHKAP35790 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CHKAP35790 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.42■■□□□ 1.02
CHKAP35790 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CHKAP35790 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.42■■□□□ 1.02
CHKAP35790 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.42■■□□□ 1.02
CHKAP35790 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.42■■□□□ 1.02
CHKAP35790 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHKAP35790 AC092118.2-201ENST00000613495 667 ntBASIC21.42■■□□□ 1.02
CHKAP35790 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.42■■□□□ 1.02
CHKAP35790 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHKAP35790 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHKAP35790 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHKAP35790 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CHKAP35790 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.41■■□□□ 1.02
CHKAP35790 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHKAP35790 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHKAP35790 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHKAP35790 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHKAP35790 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CHKAP35790 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHKAP35790 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHKAP35790 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.41■■□□□ 1.02
CHKAP35790 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.41■■□□□ 1.02
CHKAP35790 AC100791.3-201ENST00000617619 330 ntBASIC21.41■■□□□ 1.02
CHKAP35790 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHKAP35790 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHKAP35790 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHKAP35790 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.41■■□□□ 1.02
CHKAP35790 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHKAP35790 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHKAP35790 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHKAP35790 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
CHKAP35790 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CHKAP35790 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.4■■□□□ 1.02
CHKAP35790 PCDHAC2-203ENST00000615316 3011 ntBASIC21.4■■□□□ 1.02
CHKAP35790 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CHKAP35790 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHKAP35790 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.4■■□□□ 1.02
CHKAP35790 CD99P1-205ENST00000527459 561 ntBASIC21.4■■□□□ 1.02
CHKAP35790 KRT18P6-201ENST00000555540 1265 ntBASIC21.4■■□□□ 1.02
CHKAP35790 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.4■■□□□ 1.02
CHKAP35790 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.4■■□□□ 1.02
CHKAP35790 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
CHKAP35790 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.4■■□□□ 1.02
CHKAP35790 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CHKAP35790 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHKAP35790 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHKAP35790 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
CHKAP35790 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.39■■□□□ 1.02
CHKAP35790 AC027702.1-201ENST00000563810 1770 ntBASIC21.39■■□□□ 1.01
CHKAP35790 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHKAP35790 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHKAP35790 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.39■■□□□ 1.01
CHKAP35790 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.39■■□□□ 1.01
CHKAP35790 AC007322.3-201ENST00000426526 701 ntBASIC21.39■■□□□ 1.01
CHKAP35790 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.39■■□□□ 1.01
CHKAP35790 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHKAP35790 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHKAP35790 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHKAP35790 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.39■■□□□ 1.01
CHKAP35790 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHKAP35790 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
CHKAP35790 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHKAP35790 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHKAP35790 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHKAP35790 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
CHKAP35790 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.38■■□□□ 1.01
CHKAP35790 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.38■■□□□ 1.01
CHKAP35790 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.38■■□□□ 1.01
CHKAP35790 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHKAP35790 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHKAP35790 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.38■■□□□ 1.01
CHKAP35790 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.38■■□□□ 1.01
CHKAP35790 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.38■■□□□ 1.01
CHKAP35790 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.38■■□□□ 1.01
CHKAP35790 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.38■■□□□ 1.01
CHKAP35790 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHKAP35790 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHKAP35790 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.38■■□□□ 1.01
CHKAP35790 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHKAP35790 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.38■■□□□ 1.01
CHKAP35790 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHKAP35790 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHKAP35790 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHKAP35790 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.37■■□□□ 1.01
CHKAP35790 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms