Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSP1P33241 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LSP1P33241 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSP1P33241 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSP1P33241 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LSP1P33241 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LSP1P33241 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
LSP1P33241 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSP1P33241 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.38■□□□□ 0.85
LSP1P33241 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.38■□□□□ 0.85
LSP1P33241 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.38■□□□□ 0.85
LSP1P33241 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSP1P33241 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
LSP1P33241 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.38■□□□□ 0.85
LSP1P33241 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.38■□□□□ 0.85
LSP1P33241 AL031848.2-201ENST00000607670 837 ntBASIC20.38■□□□□ 0.85
LSP1P33241 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSP1P33241 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSP1P33241 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LSP1P33241 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSP1P33241 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LSP1P33241 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSP1P33241 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LSP1P33241 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LSP1P33241 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.37■□□□□ 0.85
LSP1P33241 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSP1P33241 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.37■□□□□ 0.85
LSP1P33241 AL138781.2-201ENST00000617896 1843 ntBASIC20.37■□□□□ 0.85
LSP1P33241 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LSP1P33241 AC103834.1-201ENST00000520383 144 ntBASIC20.37■□□□□ 0.85
LSP1P33241 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
LSP1P33241 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSP1P33241 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSP1P33241 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LSP1P33241 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSP1P33241 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSP1P33241 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.36■□□□□ 0.85
LSP1P33241 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.36■□□□□ 0.85
LSP1P33241 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.36■□□□□ 0.85
LSP1P33241 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSP1P33241 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LSP1P33241 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.36■□□□□ 0.85
LSP1P33241 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.35■□□□□ 0.85
LSP1P33241 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.35■□□□□ 0.85
LSP1P33241 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.35■□□□□ 0.85
LSP1P33241 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 AL691432.2-201ENST00000607222 2038 ntBASIC20.35■□□□□ 0.85
LSP1P33241 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.35■□□□□ 0.85
LSP1P33241 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSP1P33241 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LSP1P33241 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.34■□□□□ 0.85
LSP1P33241 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.34■□□□□ 0.85
LSP1P33241 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LSP1P33241 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.34■□□□□ 0.85
LSP1P33241 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.34■□□□□ 0.85
LSP1P33241 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.34■□□□□ 0.85
LSP1P33241 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
LSP1P33241 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
LSP1P33241 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSP1P33241 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LSP1P33241 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSP1P33241 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSP1P33241 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LSP1P33241 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms