Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHC1P29353 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
SHC1P29353 AC006970.2-201ENST00000450065 779 ntBASIC18.58■□□□□ 0.56
SHC1P29353 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHC1P29353 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.58■□□□□ 0.56
SHC1P29353 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SHC1P29353 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.58■□□□□ 0.56
SHC1P29353 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.58■□□□□ 0.56
SHC1P29353 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.58■□□□□ 0.56
SHC1P29353 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHC1P29353 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHC1P29353 AC116050.2-201ENST00000612102 1779 ntBASIC18.58■□□□□ 0.56
SHC1P29353 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHC1P29353 AC121338.2-201ENST00000622535 1744 ntBASIC18.57■□□□□ 0.56
SHC1P29353 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHC1P29353 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SHC1P29353 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHC1P29353 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHC1P29353 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 AC007322.3-201ENST00000426526 701 ntBASIC18.57■□□□□ 0.56
SHC1P29353 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.57■□□□□ 0.56
SHC1P29353 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SHC1P29353 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.57■□□□□ 0.56
SHC1P29353 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHC1P29353 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHC1P29353 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SHC1P29353 GABARAPL3-202ENST00000624044 1851 ntBASIC18.56■□□□□ 0.56
SHC1P29353 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHC1P29353 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SHC1P29353 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHC1P29353 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SHC1P29353 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHC1P29353 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.56■□□□□ 0.56
SHC1P29353 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SHC1P29353 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHC1P29353 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.56■□□□□ 0.56
SHC1P29353 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHC1P29353 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHC1P29353 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.56■□□□□ 0.56
SHC1P29353 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SHC1P29353 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.56■□□□□ 0.56
SHC1P29353 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.56■□□□□ 0.56
SHC1P29353 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.56■□□□□ 0.56
SHC1P29353 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.56■□□□□ 0.56
SHC1P29353 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
SHC1P29353 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHC1P29353 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.56■□□□□ 0.56
SHC1P29353 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.56■□□□□ 0.56
SHC1P29353 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.56■□□□□ 0.56
SHC1P29353 AC011484.1-201ENST00000377652 1995 ntBASIC18.55■□□□□ 0.56
SHC1P29353 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.55■□□□□ 0.56
SHC1P29353 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHC1P29353 AL391422.3-201ENST00000603791 2761 ntBASIC18.55■□□□□ 0.56
SHC1P29353 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC1P29353 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC1P29353 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.55■□□□□ 0.56
SHC1P29353 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC1P29353 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC1P29353 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC1P29353 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.55■□□□□ 0.56
SHC1P29353 AC093787.1-201ENST00000450396 207 ntBASIC18.55■□□□□ 0.56
SHC1P29353 CDV3P1-201ENST00000471403 739 ntBASIC18.55■□□□□ 0.56
SHC1P29353 RARRES2P4-201ENST00000514074 484 ntBASIC18.55■□□□□ 0.56
SHC1P29353 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHC1P29353 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.55■□□□□ 0.56
SHC1P29353 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.55■□□□□ 0.56
SHC1P29353 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.55■□□□□ 0.56
SHC1P29353 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.55■□□□□ 0.56
SHC1P29353 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHC1P29353 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.55■□□□□ 0.56
SHC1P29353 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SHC1P29353 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SHC1P29353 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SHC1P29353 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHC1P29353 PCDHAC2-203ENST00000615316 3011 ntBASIC18.55■□□□□ 0.56
SHC1P29353 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHC1P29353 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.54■□□□□ 0.56
SHC1P29353 AC073314.1-201ENST00000568729 2216 ntBASIC18.54■□□□□ 0.56
SHC1P29353 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHC1P29353 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC1P29353 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.54■□□□□ 0.56
SHC1P29353 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.54■□□□□ 0.56
SHC1P29353 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SHC1P29353 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC1P29353 AP005212.1-201ENST00000581547 1997 ntBASIC18.54■□□□□ 0.56
SHC1P29353 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC1P29353 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.54■□□□□ 0.56
SHC1P29353 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms